Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03107 ATGATTGATGCTGCCAAGGAAAATGCTCACTTAGCTCAAAAACTACATGATGTTCTACTTGAAAGTGGTGTCATTGCTCCTCCAAATTTATTTTCTGAAATTTATAACGGGTTAGGCTCCCCAACTGAAGAAAAAGATGAACACAAACCAGAAAGTGGACAAGAGACTACTTTGCCTCACCACAGAGTTCATCCGAAAGGAAGTTCAAGCAGCCAGCCAGAGCACTCTAAGCCTGTTGAAGGTTTAGGAATAAACCACCTTCTTGATCCGAAGTTAGCAGCTGTACAACATACACCATCCCAGGTAACATATGGGAAAAATATTCCAGTTGCGGCGGCTGCAGCAGCAGCTGCTGCTGTTGTTGCTACCTCTATGGTAGGTGCTGTAGCAAAGTCAAACACTGACTCGAACATTGAGCTTCCCGTAGCTGCAGCGGCCACTGCAACTGCTGCAGCTGTAGTAGCAACCACTGCAGCTGTCAGCAAACAGTATGAGCAAGGCAGTCGAAGTGACGGACACATGGATGGCACTGGTTATGAGCCGAAGGATGATGTTGCTGAATATGACATTCCGTTGGAGGAAATCACACTGGCTGAACGTATCGGACTTGGATCGTATGGGGAGGTATACCGTGGTGAATGGCGTGGAACAGAAGTTGCTGTAAAAAGATTTCTTGATCAAGATATATCTGGTGAATCACTTGAAGAATTCAAAAGTGAGGTTCAAATAATGAAAAGACTGAGGCATCCAAATGTTGTTCTCTTCATGGGAGCAGTTACTCGACCTCCGAATCTTTCTGTTGTTACTGAGTTTCTTCCCAGGAAGTTTGTACAGACTAATTCATCGACCGAACAATCAATTAGATGA 867 0.4452 MIDAAKENAHLAQKLHDVLLESGVIAPPNLFSEIYNGLGSPTEEKDEHKPESGQETTLPHHRVHPKGSSSSQPEHSKPVEGLGINHLLDPKLAAVQHTPSQVTYGKNIPVAAAAAAAAAVVATSMVGAVAKSNTDSNIELPVAAAATATAAAVVATTAAVSKQYEQGSRSDGHMDGTGYEPKDDVAEYDIPLEEITLAERIGLGSYGEVYRGEWRGTEVAVKRFLDQDISGESLEEFKSEVQIMKRLRHPNVVLFMGAVTRPPNLSVVTEFLPRKFVQTNSSTEQSIR 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03107 288 Gene3D Phosphorylase Kinase; domain 1 188 272 - -
Aip05g03107 288 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 1 275 - -
Aip05g03107 288 SUPERFAMILY Protein kinase-like (PK-like) 184 274 IPR011009 -
Aip05g03107 288 MobiDBLite consensus disorder prediction 36 82 - -
Aip05g03107 288 ProSitePatterns Protein kinases ATP-binding region signature. 201 222 IPR017441 GO:0005524
Aip05g03107 288 MobiDBLite consensus disorder prediction 40 62 - -
Aip05g03107 288 Pfam Protein tyrosine and serine/threonine kinase 195 273 IPR001245 GO:0004672|GO:0006468
Aip05g03107 288 ProSiteProfiles Protein kinase domain profile. 195 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03107 288 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03107 Aip-Chr5 134423029 134425362 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03107 1 274 MAP Kinase Kinase Kinase AT1G73660 50.617 2.19e-65 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Aip05g03107 PK_Tyr_Ser-Thr 5.7e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03107 - - aip:107641216 443.736