Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03099 ATGTCATCACCGGAGGATCCTCAGGGACACCCTCCTGGCGTGCATACTCGGTTTTCTCATTTAACAACTAATCATCCGCAGGTGCATGCCTCCCTCGCTAATCCTGGACTTTTCAAGCTGGTGCAGCATAAACTTGTCTCCATTGATGGTAATGCTTCTCACTCTGAAAATTGTTTCAAATTTACTATTCTATATGCTGCTGCGTTTGGGAATCAGTATGGACCTGAAAGCAATGGTGCCATGAGTTGCATCTTTGGTATGTCACTTTACCCACAGGATGGTGGTTCTGGTGGAAAAAGTCACCAGGGTTTGGTTTTTGGGTTAACTGGTGTTGGTGTTGCTTTGTTAGTTATGTCTTGTTTGTTAGGGGTTTATGTTTGGTATGATAGGAAGGTTAGGAGGAAGAAGTTTAATGATGATGAATTTGATTTTGATCCTGAGGAACAAAGGTCTAGGCGTAGGTTGAGGCTAAATACGAGATCTATTTGGTTCAAGATTGATGAGCTTGAGAAGGCTACTGATAATTTCTCAACCAAGAATTTCATTAGCAGGGGTGGATTTGGGCTTGTTTTCAAGGGGATTTTGTCCAATGGTTCGGTCGTGGCAGTTAAGAGGATCTTGGAATCTGATTTTCAAGGGGATGTGGAGTTTTGTAATGAGGTGGAGATTATTAGCAACCTGAAGCACTGGAATTTGGTGCCACTTCGAGGCTATTGTGTAGTGGATGATGATGATAAAAAATTTAATGACAGGGGAAGCCAGAGGTTTTTGGTTTATGATTAG 783 0.4215 MSSPEDPQGHPPGVHTRFSHLTTNHPQVHASLANPGLFKLVQHKLVSIDGNASHSENCFKFTILYAAAFGNQYGPESNGAMSCIFGMSLYPQDGGSGGKSHQGLVFGLTGVGVALLVMSCLLGVYVWYDRKVRRKKFNDDEFDFDPEEQRSRRRLRLNTRSIWFKIDELEKATDNFSTKNFISRGGFGLVFKGILSNGSVVAVKRILESDFQGDVEFCNEVEIISNLKHWNLVPLRGYCVVDDDDKKFNDRGSQRFLVYD 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03099 260 Pfam Protein tyrosine and serine/threonine kinase 179 241 IPR001245 GO:0004672|GO:0006468
Aip05g03099 260 SUPERFAMILY Protein kinase-like (PK-like) 157 244 IPR011009 -
Aip05g03099 260 ProSiteProfiles Protein kinase domain profile. 176 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03099 260 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 41 260 - -
Aip05g03099 260 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 41 260 - -
Aip05g03099 260 Gene3D Phosphorylase Kinase; domain 1 140 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03099 Aip-Chr5 134320247 134326596 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03099 41 260 Receptor kinase-like Gene Family AT1G11050 50.455 1.61e-65 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Aip05g03099 PK_Tyr_Ser-Thr 7.4e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03099 - - ahf:114924878 333.183