Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03093 ATGATCATACAGGTTTACAATCTGAGCTGCGTGAACACTCTTACTCTTTGTAGCGGATCTATCAGGAGGAGCTTCTACCCTCTAAGAGTTGCGAAGATGTACACTTTCAGGAAGAAGATCCACAAAGATAAGGATGCTGAGCCAACTGAATTCGAAGAGTCTATTGGACAGGCTTTGTTTGATCTTGAAAATACCAATACGGAGCTGAAAAGCGAACTGAAAGATTTATACATAAATTCAGCTGTTCAAGTTGATGTGTCTGGGGGTCGAAAGGCTGTAGTTATCCATGTTCCCTTTAGATTAAGGAAAGGTTTCCGGAAGATTCATGTAAGACTTGTTAGAGAGCTTGAGAAGAAGTTCAGTGGCAAGGATGTAGTGTTGATTGCCAACCGTAGGATAGTGAGGCCGCCAAAGAAAGGATCTGCAGTTCAGCGCCCTCGCAACCGTACACTCACTGCTGTGCATGAGGCAATGCTTGAGGATATTGTATTGCCTGCTGAGATCGTTGGGAAGCGTGTTAGGTATCGTCTTGATGGGTCGACAATCATGAAGGTTTTCTTGGATCCCAAGGAACGAAACAACACTGAGTACAAGTTGGAGGCTTTTGCTGCAGTATACAGGAAACTTTCAGGCAAAGATGTGGTGTTTGATTACCCTGCACAAGAGGCTTAG 672 0.442 MIIQVYNLSCVNTLTLCSGSIRRSFYPLRVAKMYTFRKKIHKDKDAEPTEFEESIGQALFDLENTNTELKSELKDLYINSAVQVDVSGGRKAVVIHVPFRLRKGFRKIHVRLVRELEKKFSGKDVVLIANRRIVRPPKKGSAVQRPRNRTLTAVHEAMLEDIVLPAEIVGKRVRYRLDGSTIMKVFLDPKERNNTEYKLEAFAAVYRKLSGKDVVFDYPAQEA 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03093 223 Coils Coil 59 79 - -
Aip05g03093 223 PANTHER 40S RIBOSOMAL PROTEIN S7 21 222 - -
Aip05g03093 223 PANTHER 40S RIBOSOMAL PROTEIN S7 21 222 IPR000554 GO:0003735|GO:0005840|GO:0006412
Aip05g03093 223 Pfam Ribosomal protein S7e 39 218 IPR000554 GO:0003735|GO:0005840|GO:0006412
Aip05g03093 223 ProSitePatterns Ribosomal protein S7e signature. 111 124 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03093 Aip-Chr5 134205277 134209676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03093 33 223 Cytoplasmic Ribosomal Protein Gene Family AT1G48830 76.963 1.37e-111 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03093 K02993 - gmx:100527642 348.591
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03093 05 134205277 134209676 Aip05g03093 05 134205277 134209676 ECH