Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03091 ATGACGTCTTCGCCACTTTCAAGACTGAAGAGAATGCCATCCAAGAAGTGGCGTCTCTCTCATACTCAGCACCAACACTTTAACGCTTCTTCTTCTTCTGTTAATTCTGGCGCTACTTTATCAATCAAAAGAGATTGCAAGGCCATTGCTGTCGTCATCATTTCGAAGTTCAAGAGAGTTATCTCTCTCTTTGGCCAAACCAGAACCGTTTCGCATGCAACTCGTGTCGGCGTCTACGGATTGGTTAGGTCTTACCTGGGGACAAAGTTATTTGGAGTGGAGGTCGTTCATCACCGGTGGTGGGTGCAGCTCGTCGCGGTAGGGCGTGAGGCTCTGAAGGTCAGTCGCTGCCTTCCTGCTGTTGCTTTCCCGGAAGCTCCAGCAGACAAAACCAGCAACCGGTCCGTGGGGTGGTGGTCGTTGTTGTCACTTTGCTTATCCCATCAGTTTAGTTTCTCATCTACCATCGCCGTCGGTAGTCATCCGGGCAATTGGCAAGTGGAGGCTGTGAGGATGTTGGAATCATGTTGGATAGTAGATGAGGTGGTAATAATGGCATCAAGTAGCAAGTTTTGGAAGGATGCGTGTATGTGGAATGAGCCTCTTGCAGATTACTGGATGGAGGGCAATGCTGGTGTGTCGAATCCACAGGACACAATGTTTGATACGAGAGTGGAGGAAGATGCTGAGTTATCCGATTGGGAAGGAAGGGGGGCTTCAATGTTGCCCGGCTTTTTGGGTTTGGATGGGTTGCGAGCAGAAGATGTTCTTGAAATGGAGTTCTCTTCACCTCAGGAGGCAGGCGGCTTCTATAACAATTACAGCCGACTAAAGGGCTTTGCATCACGGCGAGGCAAGACTGTTAGAAACACTGCCGGAGAGATCGTGTGGTACACTTTTGTTTGTAATAGGCAAGGATTTCGAGAGAAGAAATGGTTGGAAAAGGTTGATCGCAAAAGGGAGCATAAGGTAGTTACCCGATGCGGATGCATGGCGGAGATGAGGATAAAGAGGAAAGACGGTAGTGGGAGGTGGTATGTCTCGCGTTTTGTCGAGGAGCATAACCACGAACTTGCGTATGGGAAGCTTGTTGATTATCTGCGGTCACACAGGAAGATATCTGAGGTAGAAGTTGCTCAGCTAACAAGCATGAGGGAGATTGGGATTAGCATACCTAAGATTTATGAGTCTTTCGCAGCACAACTAGGGGGTTTTAATTTGGTAACATTCACAAATCAAGATATGTATAATGAGATACGGAAACAGAGAGGTCTGCAAGGCGGAGATGTAAGTGCGGCTATTAGCGATGGTCGTTCCCAGGAAGATTATGGGATTTTCGGCGATGTGCTAGCATTCGACGCTACGTATGGCCGCAACAAGTACAACCTACCCGTTGTAGTCTTTTCCGGAGTAAACCACCACAACCAGACATGCGTATTTGGAACAGCAATGGTCTCCTGCGAATCGCAGGAGTCATATATTTGGGTTCTTCGCCAGTTTCTGGAATGCATGCAAGGTAAGGCGCCGCAATCGGTCATCACGGATGGCGACCCGGCCATGCGGATAGCAATCCAGACTGTATTTCCTGATGCACATCATCGGTTGTGTGCCTGGCATCTGCTGAGGAACGCGACTGCTAACATAAGCAACCCGAGATTCACACAAATGTTTAGACACTGCATGTTGGCAGATATGGAAATCGATGAGTTCGAAGCGAATTGGGAGGCAATGCTCAACGAGTACGGTGTTAGAGAGGTTGAGTGGGTTAAGGACTTGTACACCAAAAAGCATGCTTGGGCCACCACATACATCCGCGGTAGATTTTTTGCTGGAGTACGGACTACCTCTAGGTGCGAGTCACTACATGCCAAACTAGGGAGGTTTGTCGAGAGCAGGTACGGGGTGTTAGAATTTGTCAGAAATTTTCAAAGGTGTGTGGATTTTCTGCGTGACACCGAGGACGAGCTAGACTTTCGTTCATGGTACGGAACACCTGTGCTACAAACAGACTTTGTTGAGCTGGAAAAGTCCGGGTGGACGATGTTCACCCGCGAAATGTTTCTCAGATTCCGGGATAGCCTGAAACGGTGTGTTCGTGTTAGAATATGTGAATTTAATGACACTGACAACCCTCATGCATACACTCTCCAGAAGTATCGAAGGCCTGAGATGAATTGGAAGGTTTATAGGGACCCTGTCGCGAACAGATTTACTTGCACCTGCATGCGTATGGAGTCGTTTGGTATTCCTTGTGTGCATATCCTTTCCGTGTGTGTTAGGCTTGACTTAGTGGAAATCCTTGAAAGCCTAGTGCTGCGCAGGTGGTCTAAGGCAGCCAAAATGGAGGTCCATAACCAATGTGTTGAGCAACACACTGCTGACCGAAGTGTGACCTATAGGACACGATTGGGTGCTTTCTCCCAGCTATGTAAGCGTTTAGGGCGCGTTGCTTGCATGAGTGATGAAGACTTCAAGCTTTACTCAAAGAAGCTTCTGAGTGATGCTCTCTTCCTTGAAATAAAGCACGGCCTAAGACCATCAACGGATGATATCACAGCAGCACAAGATTGCGGGGTGAAGGACCCGATTCGTGTTAGAACAAAAGGCACGGGTCGGATGAGTCAAGCATGTGGGTCTGCCCCGAAAACCAAAAGAAAGTGCAGCACATGCGGGAAGCTAGGGCACCGGAGGACTAGATGCCCCAACGGAGGCGCACAACCTTCAGCGAGGAATGATAAATCACCTGCTGGGATAAATAAACGCAAGCGATCAAAGGCACCCGTCGTTGTCGCAGATAAATCGCAGCTTGAAAATCCATGTCAACCCGTAGGCGACATTTGGGATCATTTTTCGCATGGAGAAGTCTGA 2868 0.4854 MTSSPLSRLKRMPSKKWRLSHTQHQHFNASSSSVNSGATLSIKRDCKAIAVVIISKFKRVISLFGQTRTVSHATRVGVYGLVRSYLGTKLFGVEVVHHRWWVQLVAVGREALKVSRCLPAVAFPEAPADKTSNRSVGWWSLLSLCLSHQFSFSSTIAVGSHPGNWQVEAVRMLESCWIVDEVVIMASSSKFWKDACMWNEPLADYWMEGNAGVSNPQDTMFDTRVEEDAELSDWEGRGASMLPGFLGLDGLRAEDVLEMEFSSPQEAGGFYNNYSRLKGFASRRGKTVRNTAGEIVWYTFVCNRQGFREKKWLEKVDRKREHKVVTRCGCMAEMRIKRKDGSGRWYVSRFVEEHNHELAYGKLVDYLRSHRKISEVEVAQLTSMREIGISIPKIYESFAAQLGGFNLVTFTNQDMYNEIRKQRGLQGGDVSAAISDGRSQEDYGIFGDVLAFDATYGRNKYNLPVVVFSGVNHHNQTCVFGTAMVSCESQESYIWVLRQFLECMQGKAPQSVITDGDPAMRIAIQTVFPDAHHRLCAWHLLRNATANISNPRFTQMFRHCMLADMEIDEFEANWEAMLNEYGVREVEWVKDLYTKKHAWATTYIRGRFFAGVRTTSRCESLHAKLGRFVESRYGVLEFVRNFQRCVDFLRDTEDELDFRSWYGTPVLQTDFVELEKSGWTMFTREMFLRFRDSLKRCVRVRICEFNDTDNPHAYTLQKYRRPEMNWKVYRDPVANRFTCTCMRMESFGIPCVHILSVCVRLDLVEILESLVLRRWSKAAKMEVHNQCVEQHTADRSVTYRTRLGAFSQLCKRLGRVACMSDEDFKLYSKKLLSDALFLEIKHGLRPSTDDITAAQDCGVKDPIRVRTKGTGRMSQACGSAPKTKRKCSTCGKLGHRRTRCPNGGAQPSARNDKSPAGINKRKRSKAPVVVADKSQLENPCQPVGDIWDHFSHGEV 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03091 955 ProSiteProfiles Zinc finger CCHC-type profile. 885 902 IPR001878 GO:0003676|GO:0008270
Aip05g03091 955 PANTHER OS02G0262500 PROTEIN 435 802 - -
Aip05g03091 955 SMART 26again6 737 764 IPR006564 GO:0008270
Aip05g03091 955 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 255 419 IPR031052 GO:0006355
Aip05g03091 955 Pfam MULE transposase domain 449 543 IPR018289 -
Aip05g03091 955 Pfam FAR1 DNA-binding domain 270 359 IPR004330 -
Aip05g03091 955 PANTHER OS02G0262500 PROTEIN 255 419 - -
Aip05g03091 955 ProSiteProfiles Zinc finger SWIM-type profile. 729 762 IPR007527 GO:0008270
Aip05g03091 955 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 435 802 IPR031052 GO:0006355
Aip05g03091 955 MobiDBLite consensus disorder prediction 898 927 - -
Aip05g03091 955 SUPERFAMILY Retrovirus zinc finger-like domains 866 904 IPR036875 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03091 Aip-Chr5 134189258 134196851 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip05g03091 MULE 7.1e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03091 - - aip:107620408 1501.49