Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03087 ATGCCCTGGCCAATTACCCAACCCAAAAACCTTAGTTCCACACCGGTTAAACTCGAACCCATCCCTCCCATCACCCTCGAGCTCCTCCTTCCTCTCTCCGTCATCGATCTCACTCCCTCACCTCCGTCCATCTCCCGCCGCCGTCGCCGAAACGAGCTTCGAAGCCACCGTCGTTATCGTGCAGCTCTGTTCCACCATCGTGCAGCTAgggctactgtttcaactttgaaagcaccgtcgcgcagctcggttccattgtcgccgggcttgcctcctttttccgtggcgcagctctgttccatcgtcaccggcgctatctctgttccacctgtcatcccttcgGCTGTGTTTGATGAGGATGAGGAAGATAAATACAAGGAAAGGAATTCGGAAAATAGTTTGAAGAGAAAAGAGAGTGGCGGTGGAGGAAAGTCAACCTTGGAAGAATTGATAAGGGAAGAGGAGAAGAAAAAGGAGAAAATCAACAGGAAGGACTATTGGTTGCGTGAGGGAATCATTGTTAAGATTATGAGCAAGGCCTTGGCAGAGAAGGGGTACTACAAGCAAAAGGGTGTGGTTCATTATTCCAAGCAAGGACAAATGTTCAAGTCACAGGTCCAGAGTATGCACAAGGAAATTCTGCAAAGTCCTTGGCTTTGTGAGCTTATGGCCTTCCACATCAATCTGAGGGAAACTAAGGTCCAGTCTAGGAAGGCACATGCTTTCTTTGATGGATGTTCTCTAACGTTTAAGGATGAAAAACCAGCACTCACTTGTGAGCTACTTGATTCCATCAAAATTGATATCGACTTGACTTGTTCTATATGCCTGAAGCTTCTTTCAAGATATACGTCCTTCAAATGCAATAGAGAGGTTGAACTAGCAGAGTTAGGGCATGGTGAATTCATTAAAGATAAATCTGCTTCAAAGAAAATTGTTCGAAGTGGTAATAAACGTGGACGAGGGTCTAATGATCAAGGACGGGGTAAAAAGATGTCTAAAAGAATGTACAGTTCCAAACGAGATACTAGCTGCCGAAATGTAAAGGTCAATGAGAATCTAAGTAGGAGGAAAAAGATTCTCTAA 1086 0.3867 MPWPITQPKNLSSTPVKLEPIPPITLELLLPLSVIDLTPSPPSISRRRRRNELRSHRRYRAALFHHRAARATVSTLKAPSRSSVPLSPGLPPFSVAQLCSIVTGAISVPPVIPSAVFDEDEEDKYKERNSENSLKRKESGGGGKSTLEELIREEEKKKEKINRKDYWLREGIIVKIMSKALAEKGYYKQKGVVHYSKQGQMFKSQVQSMHKEILQSPWLCELMAFHINLRETKVQSRKAHAFFDGCSLTFKDEKPALTCELLDSIKIDIDLTCSICLKLLSRYTSFKCNREVELAELGHGEFIKDKSASKKIVRSGNKRGRGSNDQGRGKKMSKRMYSSKRDTSCRNVKVNENLSRRKKIL 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03087 361 Coils Coil 144 164 - -
Aip05g03087 361 PANTHER SPX DOMAIN, ZINC FINGER, RING/FYVE/PHD-TYPE-RELATED 176 286 - -
Aip05g03087 361 MobiDBLite consensus disorder prediction 119 148 - -
Aip05g03087 361 Pfam KN17 SH3-like C-terminal domain 163 194 IPR041330 -
Aip05g03087 361 MobiDBLite consensus disorder prediction 309 344 - -
Aip05g03087 361 Gene3D - 171 212 - -
Aip05g03087 361 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 176 286 IPR033326 -
Aip05g03087 361 MobiDBLite consensus disorder prediction 321 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03087 Aip-Chr5 134083625 134086993 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03087 116 193 C2H2 Transcription Factor Family AT1G55460 61.905 8.86e-17 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03087 K16275 - gmx:100787904 172.94