Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03077 ATGTTGAAACTTGCATTGTTCTTCCTCTTAGTTCTGTTCCCATTGTTGTTCCATAGTTCCTTAGGCAACAACATCATCAACACCACTTCATCTTCAACACTTTGTGGCACAAAATCTTGCCCCAATGGACCTAACATAAGTTACCCTTTTTGGCTCTCACATGGTTCTCCCCCTCAAGAATATTGTGGCTACCCAGAATTCGGTTTAATATGCTTAGACGATGGCAACACCATTTTCTCTCCACCACCAGGTTTATACTATTATGTTAAGCACATAGACTATGATAACCATAGCATTAAGCTTATTGATTTCGACACCACAAACCAAACATGTCCAAGGGCACTTCATGGTTTTCCAATAGGGAACTTACCTCTTTCTCATTCTTCATTGAACTTGAACCTTAGCTTTTACTATAACTGTTCTACTTCTACTACTTCACACCCTTCTAATGTTCCTGATATAAGTTGTTTGAGGCAAGGGTCAAAAGAGTCTTTTGTGTTCTTGAAGGGGAATGAGAGCAAGGGTTTTGATTGGTCAGAGAGGTGTGAGGAGAATGTTGATGTGACAGTGATGAAGGATGAAATTAGTAGTAATGGTGGTGAATATGGTTTGGTGAGTGAGTTTGGTAGGGCTATGAATGAAGGGTTTGTGCTTGAATGGGAAACTGAACAGACTTGCAAAGAGTGTGAGGCTTCTGAGGGATATTGTGGATACAGTAGTACTAACAAACAGATCTTGTGTTTCTGCAAGGATGGTACTGTGAGGACCGACAATTGTCGAGCAGGGGAAAGCAAGAGCAGGTTGTCGAAATTAATTATAGGTTTAATAGCTGCAGGAATTGGAGTATTACCTATAACATGCATCATACTTTACATTTTTAGACACAAACTATCACCAATCATGCCAGAAATTTTGAAGATCAGCAATAACGACCAAGATATTGAGGCCTTCATGAAGACTCATGGACCCATATCCATAAAAAGATACACTTATTCAGATATCAAGAAGATGACCAATTCTTTCGAGTCGAAACTCGGGGAAGGTGGTTATGGAGAAGTATATAAAGGATTCCTTAACAATGGTGGTCCTGTGGCTGTAAAGCTTCTCAAAGCTTCCAAAGGGAATGGTGAGGAGTTCATCAATGAGGTCATGAGTATTAGTAAAACATCTCATGTAAACATTGTTGCATTGCTCGGATTTTGTCTCAAAGGTAACAAGAAAAAAGCTCTTGTCTATGAATACATGCCAAATGGATCGCTTGAAAAGTATATACATAACAATGATCCTGTAACCAATCCACCTTTGAGTTGGGAAAGGCTACACCGGATTGCAAAAGGGATAGCTCGAGGGCTAGAATACTTGCACCGAGGTTGCAACACGAGGATTCTCCATTTCGACATAAAACCAAACAACATCCTCCTAGACAAGAACTTTAACCCTAAAATCTCGGATTTCGGGTTGGCTAAGCTCTGCTCAAAGACACATAGCATTGTCACAATGTTGGATGCTAGAGGGACAATAGGGTACATAGCTCCAGAAGTATGGAACAGACATTTTGGTGGAGTATCGCATAAATCTGATGTATATAGTTACGGAATGATGATTCTAGAAATGGTTGGAGGGAAGCATAATAACACAAATGCTGAGGTAACTAGTCATTCTAGTGAGTTGTATTTTCCACATTGGATATACAAGCATATTGAAAGTGACAAGAGTAGTGTGGCATGGCAAGGTGCTACTATGAGCAATGAGGAAGGTAAGATAGTGAGAAAAATGATCATTGTAGGGTTGTGGTGCATTCAAACAATTCCATCAGAAAGACCTCCAATGAGTAGAGTCATTGAAATGCTTGAAGGAAGCATTGATTTGTTGCAAAGTCCACCTAAGCCTTTCAACTTTTCCCCAACTCAAACCAAAGCGGAATATTGTGCAACTTCTAGCACCGATGATTCATTTTCCCCTACTGATTAA 1971 0.3988 MLKLALFFLLVLFPLLFHSSLGNNIINTTSSSTLCGTKSCPNGPNISYPFWLSHGSPPQEYCGYPEFGLICLDDGNTIFSPPPGLYYYVKHIDYDNHSIKLIDFDTTNQTCPRALHGFPIGNLPLSHSSLNLNLSFYYNCSTSTTSHPSNVPDISCLRQGSKESFVFLKGNESKGFDWSERCEENVDVTVMKDEISSNGGEYGLVSEFGRAMNEGFVLEWETEQTCKECEASEGYCGYSSTNKQILCFCKDGTVRTDNCRAGESKSRLSKLIIGLIAAGIGVLPITCIILYIFRHKLSPIMPEILKISNNDQDIEAFMKTHGPISIKRYTYSDIKKMTNSFESKLGEGGYGEVYKGFLNNGGPVAVKLLKASKGNGEEFINEVMSISKTSHVNIVALLGFCLKGNKKKALVYEYMPNGSLEKYIHNNDPVTNPPLSWERLHRIAKGIARGLEYLHRGCNTRILHFDIKPNNILLDKNFNPKISDFGLAKLCSKTHSIVTMLDARGTIGYIAPEVWNRHFGGVSHKSDVYSYGMMILEMVGGKHNNTNAEVTSHSSELYFPHWIYKHIESDKSSVAWQGATMSNEEGKIVRKMIIVGLWCIQTIPSERPPMSRVIEMLEGSIDLLQSPPKPFNFSPTQTKAEYCATSSTDDSFSPTD 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03077 656 CDD STKc_IRAK 345 619 - -
Aip05g03077 656 Pfam Protein kinase domain 342 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03077 656 SUPERFAMILY Protein kinase-like (PK-like) 319 618 IPR011009 -
Aip05g03077 656 PANTHER - 27 648 - -
Aip05g03077 656 Gene3D Transferase(Phosphotransferase) domain 1 415 626 - -
Aip05g03077 656 PANTHER RUST RESISTANCE KINASE LR10-RELATED 27 648 IPR045874 GO:0004672
Aip05g03077 656 ProSitePatterns Protein kinases ATP-binding region signature. 345 367 IPR017441 GO:0005524
Aip05g03077 656 Gene3D Phosphorylase Kinase; domain 1 311 414 - -
Aip05g03077 656 ProSiteProfiles Protein kinase domain profile. 339 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03077 656 MobiDBLite consensus disorder prediction 628 656 - -
Aip05g03077 656 Pfam Wall-associated receptor kinase galacturonan-binding 35 103 IPR025287 GO:0030247
Aip05g03077 656 SMART serkin_6 339 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03077 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Aip05g03077 656 Pfam Wall-associated receptor kinase C-terminal 160 252 IPR032872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03077 Aip-Chr5 133966327 133969269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03077 37 630 Receptor kinase-like Gene Family AT5G38260 40.857 2.49e-144 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aip05g03077 Pkinase 1.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03077 - - ahf:112802243 1263.83