Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03073 ATGGAGTCATTTAACAGAGAAGCTAGTGGTGTGAGAGACACTGGTCCACTTCACAGTGTGAGAATAGCCTCCCCCTTTCGACAAGTGAGTGGTCCACTATATGCCACCAATGGAACTGGAGATATATTGCAGCAGAATATAGTTGTGACAGGAAACAATGTAGTGCAGAGCAATACAAGAACTTTTTCTGCTTTCCACAGAACAAGTCAACATCACTGGAATAACAACAGTGATAGGAGAAAAGAATACTTATTGATGTCCGGGCAATTGGGAATGTGTAATGATCCATGTTGTACTACCTGCCCTGCTTACTTAAAGGTTGCTCAGCATGAAAACTCAAGAATATCGAATACCTTTGGTCAAAAGTTTCATAACGATCATGATGGAGATTTCAAGGGTTTTACTAGAAAAGTTTTCTCTTTCTACTCTTCATGTATTCATGGTGTTGTCAACCCTCACACTAAAGTTGTACAACAATGGAAGATGATTCTAGCTACTTTTTGCATGGTTGCAGTTTTTCTAGATCCATTATTTTTCTTCTTATTCTATGTACAAAAGGATTTGAAGTGTATTGCTATTGACTGGAAACTTAATACGACCCTTGTTTTATTTAGAAGTTTAAATGATTTTATATATTTCTTGAACATTCTTCTCCAGTTTAGGTTGGCATATATTTCACCTGAGTCAACAATGCTTGGTGCAAGAGATTTAGTTGACCATCCAAAGAAAATTGCTCAACGTTACTTGCGTGGCTATTTTTTTCTGGACTTGTTTGTTATAATTCCTATACCTCAGATAATGATGTTGTTTGTTGTTCCAAACTACTTGGGTTCCTCAGGAATGAATTATACTAAGAATCTTCTGCGTGCGGCTATTCTTGTTCAGTATATCCCCAAATTATTGGGGTTTCTACCTCTGCTACGTGATCAGTCTCCAACAGGGTTCATATTTTCAACGGTCTGGGAAAGTTTCTTTATACATCTTCTCGTTTTTATGCTATCTGGACATGTTGTTGGGGCTAATTGGTACCTCTTTGGTCTACAGAGAGTTAATCAATGTTTGCGTGATGCCTGTCGTAATTCTAATATTACTGGATGCATTGAATTCATAGACTGTGGATACAGGCGTTTGTCAAACCAGACATCACATCATTGGAATAACAATGTGAATGCTACTGCCTGTTTTAGTTCCTTGCCTGCTGGTGCTTTTACTTTTGGGATCTACGCTAACGTTGCACCACTTGTTATACATAAAAACTACATCAAGAAATATGTATATGCACTGTTCTGGGGCTTTCAGCAAATCTGTACTCTTGCTGGTAATCAAACCCCAAGCTCTTTTGAGTGGGAAGTCCTGTTCGTGATGAGCATCATAGGATTAGGACTGTTCCATTTAGCGGTTCTCATTGGACACTTACAAAGCAGTAGTCAAGGTCTTGTACAGAGGAGAGTTGAAAACAAACTTAGAGAAAGTGCTGTTGAGGAATGGATGAGTGATTGCTGCTTACCAGAAGATCTAAAATGGAGAGTAAGACAGTCCGAAACGTATAATTGGGCTGCAACAAGAGGGGTTAAAGAAGAAATGCTTATGGAGAATATGTCAGAGGATCTCCAAAGAGACATTAGACGCCATCTCTTTAAATTTATCAAGAAAGTTCGAATTATTGCCTTGATGGATGAGCCCATCTTTGATGCCATTTGTGAGAGATTAAGGCGACGTGTATACACTAGAGGAAGTAATATATTGTGTCGTGGTGGTTTGGTCGAGAAGATAGTCTTTGTTCTGCATGGAAAACTAGAGAGCATTGAAGAAGATGGAACTAGAGTTTGCTTATTCAACGAGGATGCTTGTGGTGAAGAACTATTGATATGGTGTCTTGAAAATTCTTTAGTTAGCACAGATGATAAAAAATTGCCCCCTGAATGGAGGTTGCTTAGCAGTAGGACGGTAACATGCTTAACCGACGTCAAGGCCTTTTCACTTCGAGCTGTTGACCTTGAAGAAATAATAACCCGTTTCACAAGATTCTTGCAGAGTCCGAGGACGCTAGCAGCCATAAGGTATGAATCGCCTTATTGGAGATCCCTTGGAGCAAACCGAATTCAGGCTGCATGGAGAGACAAAAAGAATCGACTACGTGCTGCTTCACAAGCAAATTAG 2160 0.3944 MESFNREASGVRDTGPLHSVRIASPFRQVSGPLYATNGTGDILQQNIVVTGNNVVQSNTRTFSAFHRTSQHHWNNNSDRRKEYLLMSGQLGMCNDPCCTTCPAYLKVAQHENSRISNTFGQKFHNDHDGDFKGFTRKVFSFYSSCIHGVVNPHTKVVQQWKMILATFCMVAVFLDPLFFFLFYVQKDLKCIAIDWKLNTTLVLFRSLNDFIYFLNILLQFRLAYISPESTMLGARDLVDHPKKIAQRYLRGYFFLDLFVIIPIPQIMMLFVVPNYLGSSGMNYTKNLLRAAILVQYIPKLLGFLPLLRDQSPTGFIFSTVWESFFIHLLVFMLSGHVVGANWYLFGLQRVNQCLRDACRNSNITGCIEFIDCGYRRLSNQTSHHWNNNVNATACFSSLPAGAFTFGIYANVAPLVIHKNYIKKYVYALFWGFQQICTLAGNQTPSSFEWEVLFVMSIIGLGLFHLAVLIGHLQSSSQGLVQRRVENKLRESAVEEWMSDCCLPEDLKWRVRQSETYNWAATRGVKEEMLMENMSEDLQRDIRRHLFKFIKKVRIIALMDEPIFDAICERLRRRVYTRGSNILCRGGLVEKIVFVLHGKLESIEEDGTRVCLFNEDACGEELLIWCLENSLVSTDDKKLPPEWRLLSSRTVTCLTDVKAFSLRAVDLEEIITRFTRFLQSPRTLAAIRYESPYWRSLGANRIQAAWRDKKNRLRAASQAN 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03073 719 SUPERFAMILY cAMP-binding domain-like 485 678 IPR018490 -
Aip05g03073 719 Gene3D Helix hairpin bin 478 545 - -
Aip05g03073 719 CDD CAP_ED 554 678 IPR000595 -
Aip05g03073 719 SUPERFAMILY Voltage-gated potassium channels 152 475 - -
Aip05g03073 719 Gene3D - 161 477 - -
Aip05g03073 719 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 19 714 - -
Aip05g03073 719 Gene3D Jelly Rolls 552 675 IPR014710 -
Aip05g03073 719 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 19 714 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03073 Aip-Chr5 133815615 133826047 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03073 1 632 Ion Channels AT3G17700 52.038 0.0 626
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03073 K05391 - gsj:114390051 929.858