Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03072 ATGTCAAAACCTTTCTACTTGTTATGTGCATTATTCTCCACCATATTCACGACATGTTATGCTGATTCATCACCAATTTGTGCTTCTTCTGGTTGTGGTAATGGAGTTCCCATTAAGTACCCTTTCTGGAAACGTTCCGGCACCGCCGTCGGAGAAGTTTGCGGTTATCCGGATTTTGGTCTTGAATGTTCAAAAAAAGGCTACCCTATCCTCCAACTGGAAACTGACACATACTATGTTACAGACATAAACTATGTGAATCATTCAATCACACTTGTTGACATTGATGTGATGAATGATACATGTCCAAGGGCAAAGAACACCGTTTCCATAGGGAACATACCTTTGTCTTTCAGTAATTTGGATATGAACATCACTTTCTACTTCAATTGCAGTTCTCAGCCTTCAGTGGTTGGTGCCGTGCCTATCAAGTGTTTGATAAATGGTCAGGGGAAGAAGTCTTATGTGTTTGAGGTTGGAACGGATATTGGTGGTAGGACTTGGACTAACTCTTGTGATGCTGAGGTTATGGTGGCAGTGAAGCATGATCAGATCGAAAGTGGTGATTTGATCAATGGGTTTGGTGCAGCTATGAACAAAGGGTTTGTTCTTGATTGGAACAGAGCTGTGGATTGTGCTGAGTGCGAGCTTTCTGATGGGTATTGTGCATATAATGGAACTACTAGGCAAACCATGTGCATATGCAAAGATAGCATAATTGTTGCCGAAAGCTGTAAAAAAGGTGCTACAACAGTTGCAGTAATTGCAGGATTGTTGAGTATTTGTTACCTTACATACAAGTTACCAAGATGGCGAGAAAAATATAGCTTTCTGACAAAAGGACAAGGTGGTTTTGGTGTTGTATACAAGGGAAAGTTATCCGATGGTTCTAATGTGGCAGTCAAAATGTTGAATCCATCCAAAGGAAATGGTAGAGAGTTTATCAATGAAGTAGCTAGCATTAGTAGAACTTCACATGTTAATGTTGTCACCCTTTTTGGATTCTGCTTTGAAGGCCGCAAGAAAGTTCTTATTTATGAATTTATATCAAATGGTTCCCTTGACAAGTATATTTATAGAAAGGAAGGAGTTGAAACTACTGCATTGTTGAGTTGGGATAGGCTGTATCAAATTGCCAAAGGGATAGCTAGGGGGTTAGAGTACTTGCATAGAGGATGCAACACTCAAATTTTACATTTTGACATAAAGCCACATAATATTCTTTTGGATGAAAATTTTTGTCCTAAGATATCAGATTTTGGACTAGCAAAACTTTGTCCTGGGAAGGAAAGTCTTATTTCGATGTCGGATGCTAGAGGAACAATAGGGTATATAGCTCCAGAAGTATGGAATAGACATTTCGGCAAAGCTTCTCATAAATCTGATGTTTATAGTTACGGAATGATGCTTCTTGATATAGTGGGAGGAAAGAAGAACATTAATGTAGAAGGGAGTCAAACAAGTGAGATATATTTCCCTGATTGGATATACAAAAGGCTTGAACAAGGCACTCAATTAGGGCCTGAAGATGGAGTGGTGGCAATAGAGGAAAATGAATTGGTTAAGAAAATGACGATTGTGGGTTTATGGTGTATTCAAACAATTCCAAATGATAGACCTACAATGAGTAAAGTTGTAGAAATGTTAGAAGGCAGCATAGATTCCATAAAAATGCCACCAAGACCTGCTCTGTCTTCTCCTGTAAGATCGATTGCAGAATCTTCTACTTTGTTGAATTAG 1740 0.3885 MSKPFYLLCALFSTIFTTCYADSSPICASSGCGNGVPIKYPFWKRSGTAVGEVCGYPDFGLECSKKGYPILQLETDTYYVTDINYVNHSITLVDIDVMNDTCPRAKNTVSIGNIPLSFSNLDMNITFYFNCSSQPSVVGAVPIKCLINGQGKKSYVFEVGTDIGGRTWTNSCDAEVMVAVKHDQIESGDLINGFGAAMNKGFVLDWNRAVDCAECELSDGYCAYNGTTRQTMCICKDSIIVAESCKKGATTVAVIAGLLSICYLTYKLPRWREKYSFLTKGQGGFGVVYKGKLSDGSNVAVKMLNPSKGNGREFINEVASISRTSHVNVVTLFGFCFEGRKKVLIYEFISNGSLDKYIYRKEGVETTALLSWDRLYQIAKGIARGLEYLHRGCNTQILHFDIKPHNILLDENFCPKISDFGLAKLCPGKESLISMSDARGTIGYIAPEVWNRHFGKASHKSDVYSYGMMLLDIVGGKKNINVEGSQTSEIYFPDWIYKRLEQGTQLGPEDGVVAIEENELVKKMTIVGLWCIQTIPNDRPTMSKVVEMLEGSIDSIKMPPRPALSSPVRSIAESSTLLN 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03072 579 Pfam Wall-associated receptor kinase galacturonan-binding 27 94 IPR025287 GO:0030247
Aip05g03072 579 MobiDBLite consensus disorder prediction 560 579 - -
Aip05g03072 579 Pfam Protein kinase domain 281 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03072 579 ProSitePatterns Serine/Threonine protein kinases active-site signature. 397 409 IPR008271 GO:0004672|GO:0006468
Aip05g03072 579 PANTHER RUST RESISTANCE KINASE LR10-RELATED 280 576 IPR045874 GO:0004672
Aip05g03072 579 PANTHER - 29 247 - -
Aip05g03072 579 SUPERFAMILY Protein kinase-like (PK-like) 272 550 IPR011009 -
Aip05g03072 579 ProSiteProfiles Protein kinase domain profile. 274 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03072 579 Gene3D Transferase(Phosphotransferase) domain 1 350 563 - -
Aip05g03072 579 CDD STKc_IRAK 281 551 - -
Aip05g03072 579 Gene3D Phosphorylase Kinase; domain 1 281 349 - -
Aip05g03072 579 Pfam Wall-associated receptor kinase C-terminal 150 237 IPR032872 -
Aip05g03072 579 PANTHER - 280 576 - -
Aip05g03072 579 SMART serkin_6 275 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03072 579 PANTHER RUST RESISTANCE KINASE LR10-RELATED 29 247 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03072 Aip-Chr5 133801311 133804123 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03072 32 577 Receptor kinase-like Gene Family AT5G38260 39.667 2.74e-138 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aip05g03072 Pkinase 5.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03072 - - gmx:100796618 685.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03072 05 133801311 133804123 Aip03g02392 03 38010363 38013916 PCT