Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03071 ATGGCGTCCTTGTCAGAGGAAGAAGGAGCAGACAAGGTGCAACTCGCCGTTTGTGGAAAGAAAAGGCATCGCGTTCTTGGAGTCTTCGATAAATTAGAGCCAACGGAGGCGTCTTCTCATCACAGCAGAGGCGGCGGCAATGAGCTTGAAAGATGGCGGCGGCAATATTTTGGACTAGCAAAACTTTATGCTGGGAACGAAAGTCTTATTTCCATGTCAGATGCTAGAGGAACAATAGGGTATATAGCTCCAGAAGTGTGGAATAGACATTTCGGCAACCCTTATCATAAATCTGACGTTTATAGTTACGGAATGATGCTTCTTGATATTGTGGGAGAAAAGAAGAACATTAATGTAGAAGGGAGTCAAACAAGTGAGATATATTTCCCTGATTGGATATGCAAAAGGCTTGAGCAAGGAACTCAATTAGGGCCTAAAGATGGAGAGGTGGCGATAAAGGAAAATGAATTCGTTAAGAAAATGATGATTGTTGGTTTATGGTGTATTCAAACTTGA 516 0.4225 MASLSEEEGADKVQLAVCGKKRHRVLGVFDKLEPTEASSHHSRGGGNELERWRRQYFGLAKLYAGNESLISMSDARGTIGYIAPEVWNRHFGNPYHKSDVYSYGMMLLDIVGEKKNINVEGSQTSEIYFPDWICKRLEQGTQLGPKDGEVAIKENEFVKKMMIVGLWCIQT 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03071 171 ProSiteProfiles Protein kinase domain profile. 1 171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03071 171 Gene3D Transferase(Phosphotransferase) domain 1 53 171 - -
Aip05g03071 171 PANTHER RUST RESISTANCE KINASE LR10-RELATED 57 171 IPR045874 GO:0004672
Aip05g03071 171 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 57 171 - -
Aip05g03071 171 Pfam Protein tyrosine and serine/threonine kinase 57 114 IPR001245 GO:0004672|GO:0006468
Aip05g03071 171 SUPERFAMILY Protein kinase-like (PK-like) 57 133 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03071 Aip-Chr5 133794060 133800074 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03071 57 170 Receptor kinase-like Gene Family AT5G39030 53.448 6.29e-34 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aip05g03071 PK_Tyr_Ser-Thr 3.9e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03071 - - ahf:112749147 242.276