Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03069 ATGCATAAGCGGCATATATATACGCTGCTTACCATCTCTTTGTGGATGTTATTGCTAACAGCTTTGCCGCCATGCCTGTCTCAACTTTGTAGCCAGCAGCCATACAAGTGCAGAGGACTGCCTGACCTATACTACCCATTTTGGGGAAATACCCGGCCCTCTTACTGTGGCGGCGGCCACCAATTCAACCTAACCTGCTACAACTCCGACCACACATTCATTTCAATGGGGTCACAACAATTCGAAGTGGTGGACATTGACACCCAAGCTCACATCATGACAATGGTGCCGAAAGAGTATGATGTTTGCTCTCCCCGCTTGGACTTTTCCCTCAGTCCCCTCTTCTGGTACGCCAAAACTGTCCACAACATCACCATATTCTACGATTGTCCCTCGGAGGTAGTTTCTTCTGTGAACAACTTTACCTGCGGAGCGGAGAATAATCAGACTGATGGTGTATACTATGTTGGTGGGGAAGATGAGTTGTTGCAACAGAATGTAGAGCTACGGAAATGCCGGCGGCGAAAGCAAGTTCCGGCGGACGAGAGCGCTCCTTCCCCTGATGGTGGTGTGAATGCTCTGTATGCAGCTTTAGAGGTGGGGTTTCAGGTCAACTATGTGGTTTCTAAGGAGTGTATGACATGCCTCGCAACTGATGGTGTTTGCGGCAGATTTGATGATGATCATTTCATCTGCTCTCATCGCAAAAGTAATGCGTTGCACGGGAAAATGCCAGTTATCATTGGTGTTACGGGTAGTGTGGCTGGACTAATATTAATATGCATCACTATTTGGTGCTTGTTGAAATTATTCAAGTCATCTAGATGGCAAGAAAGATTTTGGTTAAGGACTAATAGGAACCAAGATATTGAGGCCTTCTTAAAAAGTCATCATGGAGTTCTAACGTTAAAGAGATATAAATTCTCAGCATTGAAGAAACTCACCAACTCCTTCAAATGTAAATTGGGAAAAGGAGGTTTTGGTGTTGTATACAAAGGATTGTTACCCAACGGATGTCCAGTGGCTATAAAGATTTTGAACCCATCCAAAGGAAACAATGAAGAATTTATTAACGAGGTAGCTAGCATCAGTAAAACTTCTCATGTTAACGTTGTCACTCTTCTTGGATTTTGTTTGGAAGGTTACAAAAAGGCTCTCATCTATGAATTTATGTTTAATGGTTCTTTAGAAAAGTTTATTTGCAGTAATAATAGAATACCAATTGCTCCATCGTTAAGTTGGAGCAAATTGTATCAAATTGCAATAGGAGTAGCGAGAGGGTTAGAGTACTTACACAAAGGATGCAATACTCGAATCTTACATCTTGACATAAAGCCACATAATATTCTTTTAGACGAGAATTTTTGTCCTAAGATATCAGATTTTGGATTATCAAAATTGTGCCTCAAGAAAGAAAGTATTATTTCTATATCAGATGCTCGAGGAACAATAGGATATATAGCTCCAGAAGTGTGGAATAAAAATTTTGGTGGAATTTCTTACAAATCTGATGTTTATAGCTACGGAATGATGCTACTAGAAATAGTTGGAGGAAGGAAGAAGAGCGACAATGCAGAAGTCTCAAGTAGTGAATATTTTCCAGACTGGGTATATAGAAGGCTTAAGGAAGTAACTCATGGGGAGGTAGCCACAGAAGAAAATGTGATCATTAGAAGAATGACTATGGTAGGTCTATGGTGCATTCAAACTATTCCAAGTGATAGACCGACAATGAATAAAGTGTTAGATATGTTGGAAGGCAATATTGATACCATAGGAATCCCTCCAAAACCTGTTATGTCTTCTCCAGTTAGATCAGAGTGA 1824 0.4079 MHKRHIYTLLTISLWMLLLTALPPCLSQLCSQQPYKCRGLPDLYYPFWGNTRPSYCGGGHQFNLTCYNSDHTFISMGSQQFEVVDIDTQAHIMTMVPKEYDVCSPRLDFSLSPLFWYAKTVHNITIFYDCPSEVVSSVNNFTCGAENNQTDGVYYVGGEDELLQQNVELRKCRRRKQVPADESAPSPDGGVNALYAALEVGFQVNYVVSKECMTCLATDGVCGRFDDDHFICSHRKSNALHGKMPVIIGVTGSVAGLILICITIWCLLKLFKSSRWQERFWLRTNRNQDIEAFLKSHHGVLTLKRYKFSALKKLTNSFKCKLGKGGFGVVYKGLLPNGCPVAIKILNPSKGNNEEFINEVASISKTSHVNVVTLLGFCLEGYKKALIYEFMFNGSLEKFICSNNRIPIAPSLSWSKLYQIAIGVARGLEYLHKGCNTRILHLDIKPHNILLDENFCPKISDFGLSKLCLKKESIISISDARGTIGYIAPEVWNKNFGGISYKSDVYSYGMMLLEIVGGRKKSDNAEVSSSEYFPDWVYRRLKEVTHGEVATEENVIIRRMTMVGLWCIQTIPSDRPTMNKVLDMLEGNIDTIGIPPKPVMSSPVRSE 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03069 607 ProSitePatterns Serine/Threonine protein kinases active-site signature. 439 451 IPR008271 GO:0004672|GO:0006468
Aip05g03069 607 SUPERFAMILY Protein kinase-like (PK-like) 300 586 IPR011009 -
Aip05g03069 607 Pfam Wall-associated receptor kinase C-terminal 162 233 IPR032872 -
Aip05g03069 607 Gene3D Transferase(Phosphotransferase) domain 1 391 592 - -
Aip05g03069 607 Gene3D Phosphorylase Kinase; domain 1 279 390 - -
Aip05g03069 607 ProSitePatterns Protein kinases ATP-binding region signature. 322 344 IPR017441 GO:0005524
Aip05g03069 607 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE, PROTEIN KINASE RLK-PELLE-LRK10L-2 FAMILY-RELATED 10 606 - -
Aip05g03069 607 SMART serkin_6 316 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03069 607 ProSiteProfiles Protein kinase domain profile. 316 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03069 607 Pfam Protein tyrosine and serine/threonine kinase 318 584 IPR001245 GO:0004672|GO:0006468
Aip05g03069 607 Pfam Wall-associated receptor kinase galacturonan-binding 30 95 IPR025287 GO:0030247
Aip05g03069 607 PANTHER RUST RESISTANCE KINASE LR10-RELATED 10 606 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03069 Aip-Chr5 133746283 133750035 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03069 14 600 Receptor kinase-like Gene Family AT1G66910 40.874 7.66e-144 430
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aip05g03069 PK_Tyr_Ser-Thr 1.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03069 - - gmx:106794113 629.017