Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03068 ATGGATGCACTGGACATAGAGAAGTGGCGATTCATAAGCCAAAGTCCTGGAAAATCAGTTGGGATCAGTTCAGTGCTTCTAGGATTTATCCTAGTTGGAAGAGCAACATTTGTTTTTCCCTCTCTCATTCTTATCCAATTTGCTTCAGAAATCCCCACATGTCACAATCTAGTGGTCTGGTCTTATGCAAGGTGCTGTTTCTATAGCACTTGCTTACAACCAGGTGAATTTACAAGGCTAGGCCACACTACGTTGCGTGAGAATGCCATCATGATCACTAGTACCATTTCTGTTGTTCTCTTCAGCACAGTGGTTACTGTAGAACAACAATATCTCAGGTCAAATTCTGCCAGAGCTTGGAACCCTTCCAAAGCTTCAGACATTGGATCTTTCCAATAA 399 0.4236 MDALDIEKWRFISQSPGKSVGISSVLLGFILVGRATFVFPSLILIQFASEIPTCHNLVVWSYARCCFYSTCLQPGEFTRLGHTTLRENAIMITSTISVVLFSTVVTVEQQYLRSNSARAWNPSKASDIGSFQ 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03068 132 PANTHER SODIUM/HYDROGEN EXCHANGER 1 106 IPR018422 GO:0006812|GO:0015299|GO:0016021
Aip05g03068 132 PANTHER SODIUM/HYDROGEN EXCHANGER 1 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03068 Aip-Chr5 133741175 133742228 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03068 1 105 Antiporters AT3G05030 52.679 9.67e-28 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03068 - - ming:122058243 116.316