Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03066 TGGGAGGAAAGAAGAACATTAATGTAGAAGGGAGTCAAACAAGTGAGATATATTTTCCTGATTGGATATACAAAAAGCTTGAGCAAGGCACTCAATTAGGACCTGAAGATGGAGTGGTGGCAATAGAGGAAAATGAATTGGTTAAGAAAATGACGATTGTGGGTGCTACAGCAGCTGCAGTAATTGTAGGATTGTTGAGTATTTGTTGTTTTACCTACATGTCACCAGCATCGCAAGAAAAATCCTGCTTTCCAACAAAGGGTAACCAAGATATTGAAACTTTCTTAAAAAATCATGGAGTGTTAACTATAAAAAGATATAAATTCTCTGATGTGAAGAAAATGACCAACTCCTTCAAAGTTAAACTAGGACAAGGTGGTTTTGGTGTTGTATATAAAGGAAAGTTATCCAATGATTCCGATGTGGCAGTCAAAATGTTGAATCCATCCAAAGGAAATGGTGAAGAATTTATTAACGAGGTAGCTAGCATTAGTAGAACTTCTCATGTTAATGTTGTCGCCCTTCTTGGATTTTGCTTAGAAGGTCACAAGAAAGTTCTCATCTATGAATTTATGTCCAATGGTTCCCTTGACAATTTTATTTACAAAAAGAACCCTAAGAATACACCACTCTTGAGTTGGGATAATTTATATCAAATTTCCATAGGGATTGCTAGAGGATTGGAGTATTTGCATAGAGGATGCAACATTCTTATTTTACATTTTGACATAAAACCACATAATATTCTTTTGGATGAAAACTTTTGTCCTAAGATATCAGATTTTGGACTAGCAAAGCTTTGTCCTAGAAAAGAAAGTCATATTTCAATGTCCGAAACTAGAGGAACAATAGGGTACATAGCTCCAGAAGTGTGGAACAGACAATTCGGTAGAGTTTCACATAAATCTGATGTTTATAGCTATGGAATGATGCTTCTAGAAATGGTAGGAATGAAGGAGAACATCCCTGCAAAGACAAGTCACACAAGTGAGATGTACTTCCCTGATTGGATATACAAAAGGCTTGATCAAGGAACTCAACTGGGACCTGATGATGATGGGGAAGTGGCCATAGAGGAAAATGATGTTGTTAAGAAAATGACAATGGTGGGTTTATGGTGCATTCAACCAATTCCAAATGACAGACCAACAATGAGTAGAGTTGTAGAAATGTTGGAGGGCAGCATGAATTCCCTGGAAATGCCACCAAGACCTGTCCTGTCTTCAATAAGAGTGGTAGTAGAATCTTCTTCTAAT 1256 0.3694 GGKKNINVEGSQTSEIYFPDWIYKKLEQGTQLGPEDGVVAIEENELVKKMTIVGATAAAVIVGLLSICCFTYMSPASQEKSCFPTKGNQDIETFLKNHGVLTIKRYKFSDVKKMTNSFKVKLGQGGFGVVYKGKLSNDSDVAVKMLNPSKGNGEEFINEVASISRTSHVNVVALLGFCLEGHKKVLIYEFMSNGSLDNFIYKKNPKNTPLLSWDNLYQISIGIARGLEYLHRGCNILILHFDIKPHNILLDENFCPKISDFGLAKLCPRKESHISMSETRGTIGYIAPEVWNRQFGRVSHKSDVYSYGMMLLEMVGMKENIPAKTSHTSEMYFPDWIYKRLDQGTQLGPDDDGEVAIEENDVVKKMTMVGLWCIQPIPNDRPTMSRVVEMLEGSMNSLEMPPRPVLSSIRVVVESSSN 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03066 418 ProSitePatterns Protein kinases ATP-binding region signature. 122 144 IPR017441 GO:0005524
Aip05g03066 418 PANTHER RUST RESISTANCE KINASE LR10-RELATED 54 415 IPR045874 GO:0004672
Aip05g03066 418 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 55 IPR045874 GO:0004672
Aip05g03066 418 Pfam Protein tyrosine and serine/threonine kinase 118 391 IPR001245 GO:0004672|GO:0006468
Aip05g03066 418 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 54 415 - -
Aip05g03066 418 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 55 - -
Aip05g03066 418 SMART serkin_6 116 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03066 418 SUPERFAMILY Protein kinase-like (PK-like) 98 392 IPR011009 -
Aip05g03066 418 Gene3D Phosphorylase Kinase; domain 1 82 190 - -
Aip05g03066 418 ProSiteProfiles Protein kinase domain profile. 116 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03066 418 Gene3D Transferase(Phosphotransferase) domain 1 191 400 - -
Aip05g03066 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03066 Aip-Chr5 133676937 133707179 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03066 53 409 Receptor kinase-like Gene Family AT1G66910 52.368 4.87e-128 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aip05g03066 PK_Tyr_Ser-Thr 6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03066 - - ahf:112751085 594.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03066 05 133676937 133707179 Aip05g03066 05 133676937 133707179 ECH