Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03065 ATGGATTACAAAGTCACAGGGATCTGGATCTTCATTTCTTTGCGGCTGATGGCAGCTTTGCCAGCATCCCTCTCTCAATCACCACCCTCCAATTATTACTCCCTGTGTGAGCAGCAATATGAGTGTGGCGAATTTCGCGACGTGTACTATCCTTTCTGGGGGCAAAACCGACCCCGCCAGTGTGGCGGTGATGACAAACTTCGGCTTTTCTGCGCCAAGGAGAATGCCAAACACTACGCTTACATTGAAATGGGGTCACAACGATTCAATGTGGTGACAATTGAGACCCTAATTAACTATTACAGGGTGAAATTGGTGCCCTTGCTAATGGATGACGGAAGACCTGATGTTTGCTCTATGGATTTCAATTATTCTCTGAATTACCTTCCATTCACCTATAACCAAACAGTGCACAACATCACCATATTCTATAATTGCAGCTACTCCTATCCGGATAATCATAGCCTAGGGTGCGGTTATGTTGTGTATTATAATGGTACGGAAAAAGAGGTTCTGGAAAGTCATCCAGACCTTCAGAATTGCGTTCATCGTATCCAAGTGGCCGCTGAGGCTGTTGCGTTGAACGGTGCTTCTGCTCGGCATTTCGGTGAAGGTGTGTTGGTGAAGTATACTTTTTCTCAAGATTGTATGAGTTGCTTGAACAGTGGAGGAACCTGCGGGAGCAACAATACGGATCAATTTACCTGCTACTGCCCTCATGGATCTAACGCCGTCCAATGTTCTCTCCCCGTTGATAATCGCCCTCCACAAAAGAGTTCAGGTGTAACAATTACAGCAATTGCAGTTATCCGAGTGTTGGTTAGTTGTTTTACGTGTAAGTTGTTAAGGTTAAAGAGTAATCGAGATATTGAGACCTTCTTAAAAAATCATAGAGTCTTGACTCTAAAGAGATATAAATTCTCGGATGTGAAGAAAATGACCAACTCTTTCAAAGTTAAGCTAGGACAAGGTGGTTTTGGTGCTGTGTACAAGGGAAAGTTACGCAACGGTTCCGATGTTGCCGTCAAAATTTTGAATCAATCCAAAGGAAATGGTGAAGATTTTATTAACGAGGTAGCTAGTATTAGTAGAACTTCTCATGTTAATGTTGTCACCCTTCTTGGATTTTGCTTAGATGGCCACAAAAAAGTTCTTATCTATGAGTTTATGTCTAATGGTTCACTTGACAAGTTTATTTACAAAAAAGAACCTAAAAATACTCCACTCTTGAGTTGGGATAATTTGTATCAAATTTCCATAGGAATTGCTAGAGGATTGGAGTATTTGCATAGAGGATGCAACATTCGAATTTTACATTTTGACATAAAACCACATAACATCCTTTTGGATGAAAATTTTTGTCCTAAGATATCAGATTTCGGACTAGCAAAGCTTTGTCCTAGAAAAGAAAGTCATATTTCCATGTCCGAAACCAGAGGAACAATAGGGTACATAGCTCCAGAAATGTGGAACAGATATTTTGATAGAGTTTCACATAAATCTGATGTTTATAGCTATGGAATGATGCTTCTAGAAATGGTAGGAATGAAGGAGAAGAACATAATTGCAGAGACAAGTCAAACAAGCGAGATGTACTTCCCTGATTGGATATACAAAAGTCTTGAACAAGGCACTCAGGTAGGACCTAAAGACGAAGAGTTATCAATGGAGGAAAATGATGTTGTCAAGAAAATGACAGTGGTGGGTTTATGGTGCATTCAACCAATTCCAAGTGATAGGCCAACAATGAGTAAAGTTGTAGAAATGTTGGAAGGCAGTATGAATTCCCTGGAAATTCCACCAAGAGGTCTGTCTTCTCCAATAAGAGTGGTGATAGAATCTTCTACGGTTGTACCGTTGGTAGAATCTTCTTCTATTGTATCCGTTGTAGAATCTTCTACTGGTGTAGAATCTTCTATTGTATCAAACACACATTATAACCTGAATGTTTTCACTGAAAACAAAAATGTCAGCTAG 1977 0.4001 MDYKVTGIWIFISLRLMAALPASLSQSPPSNYYSLCEQQYECGEFRDVYYPFWGQNRPRQCGGDDKLRLFCAKENAKHYAYIEMGSQRFNVVTIETLINYYRVKLVPLLMDDGRPDVCSMDFNYSLNYLPFTYNQTVHNITIFYNCSYSYPDNHSLGCGYVVYYNGTEKEVLESHPDLQNCVHRIQVAAEAVALNGASARHFGEGVLVKYTFSQDCMSCLNSGGTCGSNNTDQFTCYCPHGSNAVQCSLPVDNRPPQKSSGVTITAIAVIRVLVSCFTCKLLRLKSNRDIETFLKNHRVLTLKRYKFSDVKKMTNSFKVKLGQGGFGAVYKGKLRNGSDVAVKILNQSKGNGEDFINEVASISRTSHVNVVTLLGFCLDGHKKVLIYEFMSNGSLDKFIYKKEPKNTPLLSWDNLYQISIGIARGLEYLHRGCNIRILHFDIKPHNILLDENFCPKISDFGLAKLCPRKESHISMSETRGTIGYIAPEMWNRYFDRVSHKSDVYSYGMMLLEMVGMKEKNIIAETSQTSEMYFPDWIYKSLEQGTQVGPKDEELSMEENDVVKKMTVVGLWCIQPIPSDRPTMSKVVEMLEGSMNSLEIPPRGLSSPIRVVIESSTVVPLVESSSIVSVVESSTGVESSIVSNTHYNLNVFTENKNVS 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03065 658 Pfam Protein tyrosine and serine/threonine kinase 317 590 IPR001245 GO:0004672|GO:0006468
Aip05g03065 658 SUPERFAMILY Protein kinase-like (PK-like) 296 591 IPR011009 -
Aip05g03065 658 SMART serkin_6 315 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03065 658 ProSiteProfiles Protein kinase domain profile. 315 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03065 658 Gene3D Transferase(Phosphotransferase) domain 1 390 599 - -
Aip05g03065 658 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE, PROTEIN KINASE RLK-PELLE-LRK10L-2 FAMILY-RELATED 13 616 - -
Aip05g03065 658 Gene3D Phosphorylase Kinase; domain 1 289 389 - -
Aip05g03065 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 437 449 IPR008271 GO:0004672|GO:0006468
Aip05g03065 658 PANTHER RUST RESISTANCE KINASE LR10-RELATED 13 616 IPR045874 GO:0004672
Aip05g03065 658 ProSitePatterns Protein kinases ATP-binding region signature. 321 343 IPR017441 GO:0005524
Aip05g03065 658 Pfam Wall-associated receptor kinase C-terminal 161 240 IPR032872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03065 Aip-Chr5 133615239 133643054 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03065 36 602 Receptor kinase-like Gene Family AT5G38260 40.772 3.12e-141 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aip05g03065 PK_Tyr_Ser-Thr 2.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03065 - - ahf:112751085 1060.44