Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03058 ATGAGGTGTGTCCCGTTTAGCTGGTTTCAATGCTACACTACAAGGAAGAACCAACCTCAACAGATTTCAAACCACCCTCAACAATTTTCTTCAGATTTTGGGTTCCAATTTCATACATTCTCCTATGAAGAACTTTTAATAGCCACCAAGCATTTTGCTTCCTCTGGGATACTCGGAAAGGGAAGCTTTGGCATAGTATATCATGGTAAACTTCAAGATGGGAGACAGATTGCAGTCAAATCCTTGCGCGAAAACAATGACAAGAAAGTTCAACAGTTTGTCAATGAAATAGAAGTCTTAAGCAAATTGAGCCATCAAAACCTTGTCCCATTTTATGGCTACTGTCACCGCCATGACCATGAATTCATGCTAGTATTTGAATTTGTTTCCAATGGAACTCTGGCCGATCATCTTCATGGAAAGCGTAAGAAACAAGGCACTCTAGTACCCTGGCATACCAGATTGAACATAGCAATTGAGGCTGCAAGTGCATTGGCTTATCTTCATAATTCAGGAATTATTCACCGCGACATAAAATCCTCCAACATTCTTTTGGATGATAACTTGTGTGTTAAGGTAGCCGATTTTGGCCTTTCGCGCACGCTTCCTTTGGTTGTTTCAACTTCAAAAGAGGCTGCTACTTTTGCTTCTCATGCCTCAACTGCTCCACAAGGAACAAATGGATATATAGACCCTGACTATTTTCAATTTCACAGGGTTTGTGACAAGAGTGATACTTATAGCTTTGGCGTGGTTTTAGCCGAGATTATATCTTCGTTGCCAGCGGTTGATGATACATGGAATCCATATGAGGTACCATTACTGTCTCACCTTGCCATGAACAAAATCCAAAATGAAGCATTGCACGAGTTGGTGGATCCATGCCTTGGTTTTCAACCAGACAATGAGATTGGAGAATCTATAACTGCTGTGGCTGAGTTGGCATTTCAGTGCCTGCAATGTCCTAAGGAACTAAGGCCATCTATGAAGCAGAAAATCGGAGTCACCATTTCATTCAGCAACTTCTTACTTTCCAGAAATAATGACCTGATGAGGTTGAGGTGTGATCTTCTTCAGTGCTGCTTCACTAGCACTTCTTCAAATGGTGTTATTCAGATAAAGGGGAAAATCTTCCCCTACTTGATTCTTGCACAAGCAACAAATAATTTTAATAAACGTAATTGTCTTGGAAAGATAGGCTTGAAGAATCTATACTATGGCAAACTTAGAGATGGGTGTGAGATTGTAATTGAAAGAGTATCATCCAATGACAAGAGGCAAATATTTCAGCAGTTCCTCAATGAAATTTTGGTTTCGAATATCCTGCATCACAAGAATCTCGTGACATTTTGCGGTTATGCCTTTCATCATGAGGAATTCCTGGTAGCACATGAATATCTCTCCAATGGCACTCTTGCTGCTTATCTTGAATGTGAAATCCAACATAATAAATGCACATTACCTTTGCTTACTCGAATGGAAATTGCCATCGATATTGCGAATGCATTGAGCTATCTTCACAAGCATGGCATCATCCACCATAACATAAACTCCAGCAATATTCTGCTAGATAAGAACATGTGTGCTAAAGTTGCTGGCTTGCACTTATCAAGGAAACTTCCAGAGGATGTTTCTGTCAATGCCACCAGCATTGTTTCAATTTCAAGTGATATAGCAAAAAATTGTGTTTACATTGACCCAGAGTATGTGTCTCATGGCAGAGTCAGCACCAAGAATGATGTTTATAGCTTCGGAGTAGTGTTGTGCGATTTGATATCATCCAAGCTTGCTAAGTATTGGGAAGGTTGTGACCGAGAAAGTATTGCTGTCCTTTTAGGCAGAAATATTGAAAATCAAGCTTTGGACAAGGTATTGGATCCAAGAACTGGCTTCCAATCAGACCATAAGATCATGCAGGTGATGACTGCAATGGCAGAGCTTGCACTTAATTGCGTGGGATTTCCACAAGAACAAAGGCCAAATATGGAACAGGTGCTAGATATCCTCAATGGCAAGAGACTAGAGAGATATAAAACAATAGAAGCTTTCAGAATCTTTGACTATGCTGATCTCAGAAAAGCTACCATGCAATTTCGTCGAGATAGGATCCTTGGAGAGGGAGGGTTCGGCAGCGTATTTTATGGAAAACTTCAAGATGGACTTGAAGTTGCAATAAAACGTTTCCACAACATGCGGGAAAATTCTCTTAAGCAATTCATGAATGAAATCGAGATCTTAAGACTCTTGCACCATAGAAACCTGGTTTCACTCTACGGCCGCAGCTCTGGTGAACATAACGAACTCTTTCTAGTCTATGAGTACGTCCCCAATGGCACTGTCTCTAGACATATTCATGGAGGTAAAATTGAAAAGCTACCATGGCTTACTAGATTGAATATTGCCATAGAAACTGCAACTGCATTGGCATATCTTCATGATTCAGGTATCATACACCGTGATGTAAAAGGAAGTAATATCCTCTTGGATGAAATTTTTTCTGTTAAAGTTGCAGATTTCGGACTCTCACGGTCCCAACCAGATTATGTTACTCATGTGTCAACAGCTCCAGCAGGGACAAATGCCTATATGGATCCGGAATATTTCCAAACAGGCAGGGTTTCCTATAGAAGTGATGTATATAGCTTTGGAGTGGTCTTGTTTGAGCTCATATCATCTAAACCTGCATTTTGGAGGGATGTCCCACACGGCGAGGCGGTTGGCCTCGCAAAGTTTGCAATAATCAAACTGTTAAATAACACATTGAAGGAGCTAGTAGATCCAGATATTGGCTATGATTCAGATAAAGATGTAACGGAAATGGTAACAGCAGTGGCAGAGTTGGCCTTTCAGTGCATTCAGTGTCCTAAAGAGCTTAGACCTTCCATGAAACAGGTGCTGGAGACCCTTGAGGGTATAAAGAAGGGAACATGGGGATTCAACCAGATAACTTAG 2952 0.4075 MRCVPFSWFQCYTTRKNQPQQISNHPQQFSSDFGFQFHTFSYEELLIATKHFASSGILGKGSFGIVYHGKLQDGRQIAVKSLRENNDKKVQQFVNEIEVLSKLSHQNLVPFYGYCHRHDHEFMLVFEFVSNGTLADHLHGKRKKQGTLVPWHTRLNIAIEAASALAYLHNSGIIHRDIKSSNILLDDNLCVKVADFGLSRTLPLVVSTSKEAATFASHASTAPQGTNGYIDPDYFQFHRVCDKSDTYSFGVVLAEIISSLPAVDDTWNPYEVPLLSHLAMNKIQNEALHELVDPCLGFQPDNEIGESITAVAELAFQCLQCPKELRPSMKQKIGVTISFSNFLLSRNNDLMRLRCDLLQCCFTSTSSNGVIQIKGKIFPYLILAQATNNFNKRNCLGKIGLKNLYYGKLRDGCEIVIERVSSNDKRQIFQQFLNEILVSNILHHKNLVTFCGYAFHHEEFLVAHEYLSNGTLAAYLECEIQHNKCTLPLLTRMEIAIDIANALSYLHKHGIIHHNINSSNILLDKNMCAKVAGLHLSRKLPEDVSVNATSIVSISSDIAKNCVYIDPEYVSHGRVSTKNDVYSFGVVLCDLISSKLAKYWEGCDRESIAVLLGRNIENQALDKVLDPRTGFQSDHKIMQVMTAMAELALNCVGFPQEQRPNMEQVLDILNGKRLERYKTIEAFRIFDYADLRKATMQFRRDRILGEGGFGSVFYGKLQDGLEVAIKRFHNMRENSLKQFMNEIEILRLLHHRNLVSLYGRSSGEHNELFLVYEYVPNGTVSRHIHGGKIEKLPWLTRLNIAIETATALAYLHDSGIIHRDVKGSNILLDEIFSVKVADFGLSRSQPDYVTHVSTAPAGTNAYMDPEYFQTGRVSYRSDVYSFGVVLFELISSKPAFWRDVPHGEAVGLAKFAIIKLLNNTLKELVDPDIGYDSDKDVTEMVTAVAELAFQCIQCPKELRPSMKQVLETLEGIKKGTWGFNQIT 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03058 983 ProSitePatterns Serine/Threonine protein kinases active-site signature. 816 828 IPR008271 GO:0004672|GO:0006468
Aip05g03058 983 Pfam Protein kinase domain 699 967 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03058 983 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 369 677 - -
Aip05g03058 983 SUPERFAMILY Protein kinase-like (PK-like) 28 331 IPR011009 -
Aip05g03058 983 ProSiteProfiles Protein kinase domain profile. 698 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03058 983 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Aip05g03058 983 Pfam Protein tyrosine and serine/threonine kinase 410 667 IPR001245 GO:0004672|GO:0006468
Aip05g03058 983 Pfam Protein tyrosine and serine/threonine kinase 57 292 IPR001245 GO:0004672|GO:0006468
Aip05g03058 983 SUPERFAMILY Protein kinase-like (PK-like) 367 672 IPR011009 -
Aip05g03058 983 Gene3D Phosphorylase Kinase; domain 1 24 128 - -
Aip05g03058 983 Gene3D Phosphorylase Kinase; domain 1 364 466 - -
Aip05g03058 983 ProSiteProfiles Protein kinase domain profile. 52 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03058 983 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 678 975 - -
Aip05g03058 983 SMART serkin_6 698 967 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03058 983 SMART serkin_6 52 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03058 983 SMART serkin_6 390 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03058 983 ProSiteProfiles Protein kinase domain profile. 390 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03058 983 Gene3D Phosphorylase Kinase; domain 1 683 774 - -
Aip05g03058 983 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 678 975 IPR044652 -
Aip05g03058 983 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 17 331 IPR044652 -
Aip05g03058 983 ProSitePatterns Protein kinases ATP-binding region signature. 58 80 IPR017441 GO:0005524
Aip05g03058 983 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 17 331 - -
Aip05g03058 983 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 369 677 IPR044652 -
Aip05g03058 983 SUPERFAMILY Protein kinase-like (PK-like) 681 973 IPR011009 -
Aip05g03058 983 CDD STKc_IRAK 704 972 - -
Aip05g03058 983 ProSitePatterns Protein kinases ATP-binding region signature. 704 726 IPR017441 GO:0005524
Aip05g03058 983 Gene3D Transferase(Phosphotransferase) domain 1 129 341 - -
Aip05g03058 983 Gene3D Transferase(Phosphotransferase) domain 1 775 977 - -
Aip05g03058 983 Gene3D Transferase(Phosphotransferase) domain 1 467 682 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03058 Aip-Chr5 133487776 133492920 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03058 685 973 Receptor kinase-like Gene Family AT1G25390 56.314 3.46e-98 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Aip05g03058 Pkinase 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03058 - - gsj:114418636 743.036