Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03057 ATGAACAAGGTGTTGGATCCAAGACTTGGCTTCCAATCAGACCATAAAATCAAGCAGATGATAACTGCTGTAGCAGAGCTTGCACTTGAGTGCATGAATTCTCCACAAGAACTAAGGCCAAACATGGAACAAGTGCTAGAGATCCTCAATGGTATAAGAAAAGAGAGATTTGAAGTAAACTCAGAAAAAGCTTTTAAAATCTTCCACCATGCTGAACTTGAAGAAGCAACTAAACATTTTGACACTTGCCTTGGAAAGGGAGGGTTTGCCACTGTCTACTATGGAAAACTTAAGGATGGGCGCGAAATTGCAGTAAAACATTTCCACAACGAGATAGAAAAGTCCATCAATCAATTCATGAAAGAAATAGAGATCTTAAGTCTCTTGCAGCATCAAAATTTGGTGTTACTTTATGGCGGCAGCTCTCGTCACAGGAAGAACCATCTTCTAGTGTATGAGTACATCTCCAACGGCACCCTTTCTAAATGTCTTCAAGGACCTTCCAGTGAAAAGTTATCATGGCTTACTAGATTGAACATTGCCATTGAAACTGCAACCACGTTAGTATATCTTCATGATTCAGGCATCATCCATCGCAATGTGAAAGGAAGCAACATTCTCTTGGATGAAAACTTGACTGTTAAGGTTGCAGATTTTGGACTCTCAAGGTCACTTCCAAGTTCTATTACACATGTTTCAACCATGCCAGTGGGAACTCACGCTTACATAGATCCGGATTACTATGAATCTGGAAGAGTCAGTGATAGAAGTGATGTCTACAGCTTTGGCGTGGTCTTGTTTGAGCTCATATCATTGAAACCACCTAGCTTGTTGGATGATGGAGAGAGTGTTACTCTAGCCAAGTTTGGAATCACTAAGATGTTAAACAATGCAATGGAGGAGCTCGTGGATCCAATTTTCAAGTTTGGTTCAGATAAAAAGTTGATGGGAAATGATAACAGCTGTGGCAGAGTTAGCATTTCAGTGTGTGCAGTGTCCTAA 1002 0.4052 MNKVLDPRLGFQSDHKIKQMITAVAELALECMNSPQELRPNMEQVLEILNGIRKERFEVNSEKAFKIFHHAELEEATKHFDTCLGKGGFATVYYGKLKDGREIAVKHFHNEIEKSINQFMKEIEILSLLQHQNLVLLYGGSSRHRKNHLLVYEYISNGTLSKCLQGPSSEKLSWLTRLNIAIETATTLVYLHDSGIIHRNVKGSNILLDENLTVKVADFGLSRSLPSSITHVSTMPVGTHAYIDPDYYESGRVSDRSDVYSFGVVLFELISLKPPSLLDDGESVTLAKFGITKMLNNAMEELVDPIFKFGSDKKLMGNDNSCGRVSISVCAVS 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03057 333 Gene3D Phosphorylase Kinase; domain 1 51 154 - -
Aip05g03057 333 Gene3D Transferase(Phosphotransferase) domain 1 155 326 - -
Aip05g03057 333 SUPERFAMILY Protein kinase-like (PK-like) 63 277 IPR011009 -
Aip05g03057 333 ProSitePatterns Protein kinases ATP-binding region signature. 84 106 IPR017441 GO:0005524
Aip05g03057 333 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 3 316 IPR044652 -
Aip05g03057 333 ProSiteProfiles Protein kinase domain profile. 78 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03057 333 PANTHER TYROSINE KINASE FAMILY PROTEIN 3 316 - -
Aip05g03057 333 Pfam Protein tyrosine and serine/threonine kinase 80 272 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03057 Aip-Chr5 133485625 133487035 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03057 3 55 Receptor kinase-like Gene Family AT1G25390 39.623 5.71e-08 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Aip05g03057 PK_Tyr_Ser-Thr 1.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03057 - - adu:107490529 592.808