Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03056 ATGAGGTTGTGTAGTGATCTCTTTCAAAGCTGCTTCCCCGGAACTTCTTCTGGCACATCTCCAAATGATTCAATTCAGATAAAGTGGCCAATCTTATCCTACCGGGAACTTGCAAAAGTTACAAATAATTTTGACCAATGTAATATGCTTGGAAAGATAGGCTTGGAGAAAGTTTACCATGACAAAAAGAATGGGCGTGAGGTTGCAATTGAAAGATATTCCAATAATGAGATGCACATATTCCAGCAGTTCCTCTATGAAGATTTGATCTCAAATATCTTACCTCATAAGAATCTGGTGTCATTTCATGGTTGTGCCTTTCATCATAAGGAGTTCCTGCTAGCACATGAATACCTCTCAAATGGCACTCTTGCTTCTTATCTTCAACTTGAAATGTCACAAAGCAGCACACTGCATTGGCTCACTAGATTAGACATTGCAATTGATGCTGCAAATGCATTGAGCTATCTTCATTATCATGGCATCGTCCATCGCAATGTAAAATCCCACAATATTCTGCTAGACAAGAACCTTTGTGCTAAACTTGGTGGCTTACATTTGTCAAGGAAACTTCCAGAAGGAGTTTCAATCGATGATACCTATGTTACAAGTGATTTAGTAGGGACACGTGGTTACATAGACCCAGAATATGTATCATATGGCAGGGTTGGTGCCACAGTTGATGTTTACAGCTTTGGAGTGGTTTTGTGTGAGCTTATATCATCAAACTCGCTAAGTATTGGAAAGGTTGCGAGGAAGAGAGTATTGCTACAATTTTAA 780 0.3923 MRLCSDLFQSCFPGTSSGTSPNDSIQIKWPILSYRELAKVTNNFDQCNMLGKIGLEKVYHDKKNGREVAIERYSNNEMHIFQQFLYEDLISNILPHKNLVSFHGCAFHHKEFLLAHEYLSNGTLASYLQLEMSQSSTLHWLTRLDIAIDAANALSYLHYHGIVHRNVKSHNILLDKNLCAKLGGLHLSRKLPEGVSIDDTYVTSDLVGTRGYIDPEYVSYGRVGATVDVYSFGVVLCELISSNSLSIGKVARKRVLLQF 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03056 259 Pfam Protein tyrosine and serine/threonine kinase 59 255 IPR001245 GO:0004672|GO:0006468
Aip05g03056 259 SUPERFAMILY Protein kinase-like (PK-like) 18 241 IPR011009 -
Aip05g03056 259 Gene3D Transferase(Phosphotransferase) domain 1 119 257 - -
Aip05g03056 259 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 28 243 IPR044652 -
Aip05g03056 259 Gene3D Phosphorylase Kinase; domain 1 30 118 - -
Aip05g03056 259 PANTHER TYROSINE KINASE FAMILY PROTEIN 28 243 - -
Aip05g03056 259 ProSiteProfiles Protein kinase domain profile. 44 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03056 Aip-Chr5 133483817 133485601 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03056 27 242 Receptor kinase-like Gene Family AT1G25390 45.662 5.14e-49 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Aip05g03056 PK_Tyr_Ser-Thr 1.2e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03056 - - ahf:112749145 527.709