Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03055 ATGCCAGTTCTCTCATTTGTATCTCAGTGTTTCTTCTTCACTAATGGTAGTGGAAGTAAACACCACGCTTCACATCCAATTATTGATTCTGAGGTGAAGGGGGGAAGCAAATTGGTGCCTCTGGATTCTGAGGAACCAAGCAGTGGTGATGATGAACAACATGAGCCTCTGGATTCTAAGGTTCAAACAAGCTGGGATGAACCGGTGGTTCCTGTGATCTCTGATGAGTTACCAAGTGATCATGATCAAAATCAATCACTTTTGTTGGTTGATTCTGTGTACTGCCACATAAATGAGGTGTTTGAGTATTCTGAACTTGAAGAAGCCACCAACAATTTTGACCCTAGTAGGGAACTTGGATCTGGAGGATATGGGACAGTTTATTTTGGAATACTCAAAGATGGACGTCATGTGGCAATAAAGCAGTTGCACAAAGACATGCTGAGGAGTTTAAGGTTGCATGACGAGAATTCCGAGAGCAATGATAGAGTCACCAAGTTCTCAAACGAATTTGCCATCTTATCTCACTTGAAGCATGGAAATCTTGTCCAGCTATATGGCTGCACCTCTCCTCAGAGCCATGAAGTACTGCTTGTGCAAGAGTACATTCCCAATGGAACCGCTGCAGATCATCTTCTCAACAGGAGCTCTCCTCCGTGGTCTACGCGACTAAACATCGCCATACAGACTGCAGAAGCATTGGCTTATCTACACAGTTCTAGCATAATCCACCGCAATGTGAAAACTAGCAACATTCTGCTTGACATAAATTTGAATGCTAAAGTTGCAGACTTTGGATTATCGCGCCTTTTCCCAGAAGGTGTAACTCATGTTTCCACTGATCCTGCTGGGACTCCGGGTTATGTTGATCCAGAGTACTATGAGCATGGCCATCTTTCTGAGAAGAGCGATGTGTATAGTTTCGGAGTAATATTGCTTGAGCTGATAACATCCCTGCCAGCATATAGTGAGGACGATAGAGAGCCTTTTCTTTCCAACTTTGCCATGGTTAGAATAAGCTGTGGGAGACTCCAGAGTATTGTTGACCGAGATCTTGGATTTGAGTCAGATGATTGGAATACTAAAACAATTACCGCAGTGGCAGAGTTGGCGTGTAAGTGTCTTCAGAGCCAAAGTAAATTGAGACCTTCCATGGAAGAGGTGTTGAATAGCCTTGTGAGAATTAAAAGTTGTTGA 1197 0.4336 MPVLSFVSQCFFFTNGSGSKHHASHPIIDSEVKGGSKLVPLDSEEPSSGDDEQHEPLDSKVQTSWDEPVVPVISDELPSDHDQNQSLLLVDSVYCHINEVFEYSELEEATNNFDPSRELGSGGYGTVYFGILKDGRHVAIKQLHKDMLRSLRLHDENSESNDRVTKFSNEFAILSHLKHGNLVQLYGCTSPQSHEVLLVQEYIPNGTAADHLLNRSSPPWSTRLNIAIQTAEALAYLHSSSIIHRNVKTSNILLDINLNAKVADFGLSRLFPEGVTHVSTDPAGTPGYVDPEYYEHGHLSEKSDVYSFGVILLELITSLPAYSEDDREPFLSNFAMVRISCGRLQSIVDRDLGFESDDWNTKTITAVAELACKCLQSQSKLRPSMEEVLNSLVRIKSC 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03055 398 ProSitePatterns Protein kinases ATP-binding region signature. 119 141 IPR017441 GO:0005524
Aip05g03055 398 Gene3D Transferase(Phosphotransferase) domain 1 203 398 - -
Aip05g03055 398 SUPERFAMILY Protein kinase-like (PK-like) 95 395 IPR011009 -
Aip05g03055 398 MobiDBLite consensus disorder prediction 36 65 - -
Aip05g03055 398 Pfam Protein kinase domain 116 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g03055 398 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 77 397 - -
Aip05g03055 398 Gene3D Phosphorylase Kinase; domain 1 89 202 - -
Aip05g03055 398 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 77 397 IPR044652 -
Aip05g03055 398 ProSiteProfiles Protein kinase domain profile. 113 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03055 Aip-Chr5 133470296 133473214 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03055 100 397 Receptor kinase-like Gene Family AT1G25390 52.459 1.52e-99 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Aip05g03055 Pkinase 1.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03055 - - mtr:MTR_6g082700 427.172