Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03015 ATGCATCATCATGCAAAGACAGACTCAGAGGTAACAAGCGTTGCAACTTCATCGCCGGCGAGATCACCGCCGCGCCGCCCTCTCTACTACGTCCAGAGCCCTTCAAGGGACTCCCACGACGGCGAGAAGACTGCCACGTCAGCTTCCTTCCACTCCACGCCTCTCCTGAGCCCCGCCGCGTCACCTCCACGCGCCTCCACCACTCGCAGCAACAGCAACAGCAACCTCAACGGCAAGAGCACCATCAAGGACCACCGCCACCACCACCGGAGCCACAACAACAAGGCCTGGAACAGCCACATCGATGCCATTGACGAAGAAGACCTTCTCTACGGCGACGATCGACACGATAAAACTCTCCCTCGCCGCTGCTATGTTCTAGCTTTTGTTCTTGGCTTCCTTGTTCTCTTCAGCTTCTTCTCTCTCATACTTTGGGGTGCCAGCAGACCCATGAAGCCCAAGATTTCCGTCAAGAGCATAAAGTTCGACCATCTTAGAGTCCAAGCTGGTTCAGATGCTACTGGTGTGGCCACTGACATGATCACTATGAATTCTACTCTCAAGTTCACATATCGCAACACTGGCACCTTCTTTGGGATCCATGCATCTGCAACACCTTTGGATCTCTCCTATTCAGATATTGTTATTGCTTCCGGCAATATGAAGGAGTTTTATCAATCTAGGAAGAGTCAAAGGTTGGTGAGTGTTTCAGTTATGGGCAACAAGATCCCTCTCTATGGAAGTGGTAATAGCTTGAGTAGCACAACGGGTGTTCCAACTGTGCCAGTGCCGTTGAAACTTAGCTTTGTGGTGAGATCTAGAGCCTATGTTCTTGGGAAATTGGTGAAGCCAAAGTACTACAAGAGGGTTAATTGTTCCATCACTTTGGATCCCAAGAAGCTCAATGCCCTAATTTCTCTCAAGAAGTCTTGCACATATGATGATTGA 948 0.5 MHHHAKTDSEVTSVATSSPARSPPRRPLYYVQSPSRDSHDGEKTATSASFHSTPLLSPAASPPRASTTRSNSNSNLNGKSTIKDHRHHHRSHNNKAWNSHIDAIDEEDLLYGDDRHDKTLPRRCYVLAFVLGFLVLFSFFSLILWGASRPMKPKISVKSIKFDHLRVQAGSDATGVATDMITMNSTLKFTYRNTGTFFGIHASATPLDLSYSDIVIASGNMKEFYQSRKSQRLVSVSVMGNKIPLYGSGNSLSSTTGVPTVPVPLKLSFVVRSRAYVLGKLVKPKYYKRVNCSITLDPKKLNALISLKKSCTYDD 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03015 315 Pfam Late embryogenesis abundant protein 189 284 IPR004864 -
Aip05g03015 315 MobiDBLite consensus disorder prediction 1 94 - -
Aip05g03015 315 MobiDBLite consensus disorder prediction 45 79 - -
Aip05g03015 315 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 77 313 - -
Aip05g03015 315 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 77 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03015 Aip-Chr5 132418744 132421103 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03015 - - gmx:100811519 425.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04367 03 128060669 128061508 Aip05g03015 05 132418744 132421103 PCT