Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02997 ATGGGAAGCAATATTGTAAGAGAGAAAGTGAAGCTTCTTGTGGCATTACTTGCACTGCAATTCTGCTTTGCAGGATTTCACATTGTATCAAGACTTGCACTAAACATTGGTGTTAGCAAAGTTGTTTACCCTGTATATAGAAATCTAATTGCTTTGATTTTGTTGACCCCATTTGCCTATCTATTAGAGAAGAATCAAAGACCATCTCTTACACTATCTCTATTGGTTCAGTTCTTCCTATTAGCATTATTGGGGATCACTGCAAACCAAGGCTTTTACTTGTTGGGATTATATTATGCTTCTCCAACTTTTGCCTCTGCAATGCAAAACTCAGTTCCTGCTATCACTTTTATCTTGGCCTTAACTTTAAGGCTTGAGAAAGTGAACATGGCAAGGAGAAATGGATTAGCAAAAGTTATAGGAACCATTGCAAGTGTTGGTGGTGCTACTATTATTACTCTATACAAAGGTCCTCCTCTTCTTCAGTTACAAAGCCATCAAACACTTGGAGATCATAATTCCGAAGAAATGCAACAAAATTGGAGATGGGGTTGCATATACTTGCTTGGACATTGTTTTTCATGGGCTGGTTGGATGGTTTTTCAGGCTCCTGTGGTGAAGAAGTATCCGGCGAAACTTTCGCTCACCGCGTTCACATGCTTCTTCGGATTGATCCAATTCTTGATCATAGCAGCCTTTGTAGAAACTGACTTGAGAAATTGGAAGATAGTATCATTACAAGAGCTTTTCCTCATTCTATATGCTGGAATTGTATCATCTGCAATTGTCATCTTTCTTCAAACATGGTGTATCCAAAAGGGTGGCCCTGTGTTTGTTGCTGCCTTTCAGCCGTTGCAAACAGTCCTAGTAGCTCTCATGGCAGCAATAATTCTTGGTGATCAGTTATACTCTGGAGGGGTTATTGGTGCAATCCTCATTGTGCTTGGTCTCTACTTAGTCCTATGGGGAAAAACCAGTGAAAAGAACATTACTGAACCACCATCATCATTAACAAAGCCCTTGTTGCTGAATGAAGAGGAAGAGATTAAAGTTGATGATGCAGCTTCAAAAGACATACCATGA 1083 0.397 MGSNIVREKVKLLVALLALQFCFAGFHIVSRLALNIGVSKVVYPVYRNLIALILLTPFAYLLEKNQRPSLTLSLLVQFFLLALLGITANQGFYLLGLYYASPTFASAMQNSVPAITFILALTLRLEKVNMARRNGLAKVIGTIASVGGATIITLYKGPPLLQLQSHQTLGDHNSEEMQQNWRWGCIYLLGHCFSWAGWMVFQAPVVKKYPAKLSLTAFTCFFGLIQFLIIAAFVETDLRNWKIVSLQELFLILYAGIVSSAIVIFLQTWCIQKGGPVFVAAFQPLQTVLVALMAAIILGDQLYSGGVIGAILIVLGLYLVLWGKTSEKNITEPPSSLTKPLLLNEEEEIKVDDAASKDIP 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02997 360 PANTHER WAT1-RELATED PROTEIN 8 338 - -
Aip05g02997 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 143 - -
Aip05g02997 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 237 325 - -
Aip05g02997 360 Pfam EamA-like transporter family 15 153 IPR000620 GO:0016020|GO:0016021
Aip05g02997 360 Pfam EamA-like transporter family 183 321 IPR000620 GO:0016020|GO:0016021
Aip05g02997 360 PANTHER WAT1-RELATED PROTEIN 8 338 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02997 Aip-Chr5 132275004 132276959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02997 1 357 Nodulin-like Gene Family AT3G18200 66.120 3.27e-177 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02997 - - gmx:100812601 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g02997 05 132275004 132276959 Aip05g02997 05 132275004 132276959 ECH