Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02974 ATGCCTTCGCTTGTCGATCTGCAAGGAACACTGGCCTCAGGTAGTGTCACATGGGAAGCTGTCTTGGTCAACAGGGCTGCTGATTCTAATTTGTTGAAACTCGAGGAAAGAGCCCTGGAGTTGACAATCACGCCAACGGGACCCAGCATGGAAGTAGTTATAGATAGCAATTTAGTGGGCAAGCTTGCGGTGTTAGTGGCTGATTATATGGGTGGTCCAGTTGGAGATCCAGAAAGCATGACAAGAGCATGGAAGAGTCTTAGTTATAGTCTGAAAGCAACCCTTGGCAGTATGGTTTTGCCACTCGGTTCTCTAACCATTGGATTGGCCAGGCATCGTGCATTGTTATTTAAGGTTCTAGCGGATAGTTTGGGCATCCCATGCCGGTTGGTGAAAGGGCAGCAGTATACCGGCTCTGACGATGTAGCAATAAATTTTGTCAAGATTGATGATGGAAGGGAGTACATTGTTGACCTGATGGCAGATCCCGGGACACTTATTCCATCCGATGCAACTGGATCACACATTGAATATGTTGAATCTTCTTTTGTGGCAATTCCTTCATCAAGAAACCTTGATTCCTCTCATGTAGCATCATTGAACAGTGGTGTTGAAAGTTCATCTGAGGAAACATCAGAGTTCGGCATGTTGGACAAAGGGAACAATATATCTAAACATTTTTTGCATTCAGGGAAAGAATCTGGTATGAGCAGACTTGCTACGAGGACTGAAGATTCAGTAGGACCCTTGAGTGAATCAACTAGTCCCCATAATGTTGAGAAGATCACCGGGCGGGAAGCTCCAAATAGACCGAATCAACGATATGCACATGCAAGATCTCCTTCTTGGACTGAAGGGATTAGTTCCCCTGCCGTGCGCAGAATGAAAGTCAAAGATGTTTCATTATATATGATTGATGCTGCCAAGGAAAATCCTCACTTAGCTCAAAAATTACATGATGTTTTACTTGAAAGTGGTGTCATTGCTCCTCCAAATTTATTTTCTGAAATTTATCACGAGTTAGGCTCCCCAACTGAAGAAAAAGATGAACACAAACCAGAAAGTGGACAACAAGAGACTCAGGTTGATGAAAGTCTCGGTCCTACTTTGCCTCACCACAGAGTTCATCCGAAAGGAAGTTCAAGCAGCCAGCCGGAGCACTCTAAGCCTGTAGAAGGTTTAGGAATAAACCTTCCTCTTGATCCGAAGTTAGCAGCTGTACAACATACACCATCCCAGGTAACATATGGGAAAAATGTTCCAGTTGCGGCGGCTGCAGCAGCAGCTGCTGCTGTTGTTGCTTCCTCTATGGTAGCTGCTGTAGCAAAGTCAAACACTGACTCGAACATTGATCTTCCAGTAGCTGCAGCAGCCACTGCAACTGCTGCAGCTGTAGTAGCAACGACTGCAGCTGTCAGCAAACAGTATGAGCAAGGCAGTCGAAGTGATGGGGACATGGATGGCACTGGTTATGAGCCAAAGGGTAGTGGTGATGGTGAGAATATTGTGGTAGGAGCAAATTCAGAAGGTGACAGAATATCTGATAGATCTATAGTAAGCAATGACAGTACAAAATCTGATTTTACATTAGATGATGTTGCTGAGTATGACATTCCGTGGGAGGAAATCACACTGGGTGAACGTATTGGACTTGGATCGTATGGGGAGGTATACCGTGGTGAATGGCGTGGAACAGAAGTTGCTGTAAAAAGATTTCTTGATCAAGATATATCTGGTGAATCACTTGAAGAATTCAAAAGTGAGGTTCAAATAATGAAAAGACTGAGGCATCCAAATGTTGTTCTCTTCATGGGAGCCGTTACTCGACCTCCGAATCTTTCTATTGTTACTGAATTTCTTCCCAGAGGAAGTTTGTACAGACTAATTCATCGACCAAACAATCAATTAGATGAGCGAAGGCGGTTGAGGATGGCCCTCGATACTGCCCGAGGAATGAACTATTTGCACAACTGCACTCCAGTGATTGTACACCGTGATTTGAAGTCACCAAATCTTCTTGTTGATAAAAATTGGGTTGTGAAGGTATGTGATTTTGGCTTATCAAGAATGAAGCACAGTACATTCCTTTCTTCCAGATCAACTGCAGGAACAGCCGAGTGGATGGCGCCTGAAGTGTTAAGAAATGAACCTTCAAATGAAAAGTGCGATGTGTATAGCTTTGGAGTCATATTATGGGAGCTCTCTACTTTGCAACAGCCCTGGGGTGGAATGAATCCGATGCAAGTTGTGGGTGCTGTTGGTTTCCAGCATCGCCGCCTTGACATTCCAGATGATATGGATCCTGCCATCGCGGATATTATCAAGCAATGCTGGCAGACAGATCCAAAGTTAAGACCTACATTCGCTGAAATAATGGCAGCGCTGAAGCCGTTGCAGAAGCCGATCATTGGTTCTCAATCTCAAGTGCCGAAACCGGGTAGGCATGAGAAGGCTCAGTCATCAAGAGTTGGTGCAGACTCGGCAGGATAG 2490 0.4478 MPSLVDLQGTLASGSVTWEAVLVNRAADSNLLKLEERALELTITPTGPSMEVVIDSNLVGKLAVLVADYMGGPVGDPESMTRAWKSLSYSLKATLGSMVLPLGSLTIGLARHRALLFKVLADSLGIPCRLVKGQQYTGSDDVAINFVKIDDGREYIVDLMADPGTLIPSDATGSHIEYVESSFVAIPSSRNLDSSHVASLNSGVESSSEETSEFGMLDKGNNISKHFLHSGKESGMSRLATRTEDSVGPLSESTSPHNVEKITGREAPNRPNQRYAHARSPSWTEGISSPAVRRMKVKDVSLYMIDAAKENPHLAQKLHDVLLESGVIAPPNLFSEIYHELGSPTEEKDEHKPESGQQETQVDESLGPTLPHHRVHPKGSSSSQPEHSKPVEGLGINLPLDPKLAAVQHTPSQVTYGKNVPVAAAAAAAAAVVASSMVAAVAKSNTDSNIDLPVAAAATATAAAVVATTAAVSKQYEQGSRSDGDMDGTGYEPKGSGDGENIVVGANSEGDRISDRSIVSNDSTKSDFTLDDVAEYDIPWEEITLGERIGLGSYGEVYRGEWRGTEVAVKRFLDQDISGESLEEFKSEVQIMKRLRHPNVVLFMGAVTRPPNLSIVTEFLPRGSLYRLIHRPNNQLDERRRLRMALDTARGMNYLHNCTPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKHSTFLSSRSTAGTAEWMAPEVLRNEPSNEKCDVYSFGVILWELSTLQQPWGGMNPMQVVGAVGFQHRRLDIPDDMDPAIADIIKQCWQTDPKLRPTFAEIMAALKPLQKPIIGSQSQVPKPGRHEKAQSSRVGADSAG 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02974 829 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 826 - -
Aip05g02974 829 PRINTS Tyrosine kinase catalytic domain signature 617 630 IPR001245 GO:0004672|GO:0006468
Aip05g02974 829 PRINTS Tyrosine kinase catalytic domain signature 656 674 IPR001245 GO:0004672|GO:0006468
Aip05g02974 829 PRINTS Tyrosine kinase catalytic domain signature 703 713 IPR001245 GO:0004672|GO:0006468
Aip05g02974 829 PRINTS Tyrosine kinase catalytic domain signature 722 744 IPR001245 GO:0004672|GO:0006468
Aip05g02974 829 PRINTS Tyrosine kinase catalytic domain signature 766 788 IPR001245 GO:0004672|GO:0006468
Aip05g02974 829 ProSiteProfiles Protein kinase domain profile. 543 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g02974 829 MobiDBLite consensus disorder prediction 225 287 - -
Aip05g02974 829 Gene3D Transferase(Phosphotransferase) domain 1 622 805 - -
Aip05g02974 829 SMART serkin_6 543 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g02974 829 MobiDBLite consensus disorder prediction 342 397 - -
Aip05g02974 829 Pfam Ethylene-responsive protein kinase Le-CTR1 1 167 - -
Aip05g02974 829 ProSitePatterns Serine/Threonine protein kinases active-site signature. 662 674 IPR008271 GO:0004672|GO:0006468
Aip05g02974 829 Gene3D Phosphorylase Kinase; domain 1 536 620 - -
Aip05g02974 829 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 1 826 - -
Aip05g02974 829 MobiDBLite consensus disorder prediction 803 829 - -
Aip05g02974 829 MobiDBLite consensus disorder prediction 342 358 - -
Aip05g02974 829 Pfam Protein tyrosine and serine/threonine kinase 543 795 IPR001245 GO:0004672|GO:0006468
Aip05g02974 829 SUPERFAMILY Protein kinase-like (PK-like) 523 794 IPR011009 -
Aip05g02974 829 MobiDBLite consensus disorder prediction 474 500 - -
Aip05g02974 829 ProSitePatterns Protein kinases ATP-binding region signature. 549 570 IPR017441 GO:0005524
Aip05g02974 829 MobiDBLite consensus disorder prediction 236 260 - -
Aip05g02974 829 CDD STKc_MAP3K-like 549 795 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02974 Aip-Chr5 131683117 131692023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02974 1 812 MAP Kinase Kinase Kinase AT1G73660 64.520 0.0 960
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Aip05g02974 PK_Tyr_Ser-Thr 1.9e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02974 - - gmx:100816332 1275.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g02974 05 131683117 131692023 Aip05g02974 05 131683117 131692023 ECH