Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02932 ATGGGGTTGCCTCACCAGTTACCGCCACCTACTCTACTCTCCACTGGTCTTAGCATTCACCGTCGCCGTCCAGCCAAGCCGTCGCCGTTGCCGTCCAATCCATCTTCCAGCGTCGTTCGTAGGCTCTCCCTCCCCGTCTCCTCTTCTCTCTTCTCTCTTCTCTCTTCTCTCGTCGAGTGGTTGTCAGCGCTGTGGTGCTCCATTCCCCCTGCATCCTCCACTTCCAGAGTAACAATGGAGCCTCAGACTCAGGAAGCATCAAATAGTCAAAGACACACAAGTGATCAAAATGTGCATAATGTTAGTGATCATGTGGATGAAGACGTAACTTCTGATGCGGTGGATATGGATCAATATCGCATAAACTCTTGGGAAGATATTGGTAAGATTGATTTTTCAAGTCTATCTATGAAAAATATTTGTCAATTGCACTTTGCTGATCTTGGCTTGGCATTCGAATTTTATAATTCATATGCCAAGACGAGGGGCTTCAGTGTGCGAAAGAGTAGGAGTAGAATAGTTGATGGAAAAGTTAGAGAAAAAGCATATGTTTGTTCTTGTGAAGGGTATAGATTAGAAAAATGGAACCATATGAAAAATCGAGTTAGGGAGCCAAAACCAGAGACAAGATGTGGTTGTATGAGTAAACTTCATGTTTTCTTTGATGCGGTAATTGAGAGTTGGGTAGTGAGAGATTTTTGTGATGAACACAATCATGATCTTGTTGTTCCAAAGTTAGCAAGAATGTTAAGATCTCACAAGAAAATGACTGAGCCTGACATTAGTCAAATGAACCATATGAAAGAGGTGGGGATCAGCATACCAAACATATTTGGGTCATTAGCTAGCCAGTGTGGTGAGTACGAGAACATTAATTTTTCAATTAAGGATATGCACAATCAAGTTGCGAAGCAAAGAAGACAATTACCTGATGATTTAACCTCTGCAATGGCTTACCTGGAAATGCTAGCAGCAAGGGATCGAAACTTGTTCTATAGTGTTGAAAAGGGCAGAGAAGGAGTGTTTCGGCAAATTTTTTGGTGTGATGGCCGGTGTCAGTTGGATTACGATCTATTCGGAGATGTGCTAGCATTTGACGCCACATATAAGAAGAATAGATACAGATTGCCGGTGGTAATATTCTCGGGAGTTAACCACCATAATCAAACCGTTGTATTTGGTGCTGCGATAGTTTCGAATGAGAGGAAAAGCACCTATGTGTGGTTACTAAAACAACTTCTCATAGCAATGAAGGGAAAGATACCGACTTCAGTAATTACGGATGGTCATCAATCGATGGCTATCGCTATTCGGGAAGTGTTTCCGAATGCACATCATAGGTTATGTGCCTGGCACTTGATGCGTAATGCAACGAGCAATATTCACAAACCTCAGTTTACGAAAATGTTTACAAAGTTAATGCTAGGTGATTACGAAGTTGGTGTGTTCGAACAAAAGTGGGAGGAAATGGTTGGATTCTTTGGAGTGGAAGATCGGGAATGGATAGCAGATATGTATGGGAAAAGAAACATGTGGGCTACCGCTCATATCCGAGGAAAATTCTTTGCTGGGTTTAGAACGACTTCGAGGTGTGAAAGTCTACATGCTGTCCTCAAAAGATATGTTAAATCACGCCATAATTTGACAGAATTTGTTCAACACTTCCAGCGTTGTTTGAGCTACATGCGGCACAGAGAGGATTTGGCAGACTTTAAATCATCAACTGGACAACCTGTGATGCAGACACACTTTCAACAATTAGAAAGGTCAGCAGCTACCATTTATACCCGGCAAATTTTTATGTTGTTCCGTTCAATGCTCCACAAGGCCAGCACTTTGAAGGTAATATATGAAAAAGAAACGAGTTCTTGCAAGATTTATCAGGTGTCAAAATTTTACAAGCCTAACATGATATGGCATGTGTCTTTTCATGGAGAGCAAGATGAATTTAAATGCTCATGCATGAGAATGGACTCCATAGGTATTCCATGCAGTCATATACTTGCTGTTTTGGGTTTTGTAGACATTGCAGAGCTGCCAAAATCATTAGTGCTGCGAAGATGGACTAGAAAAGCGAAGGAAGGCATTAGTGGGTATGACGACATGGGCGGCTTGATGGAGGATTCCTTGGCTATCAGTCGGCGTGCATGTTTGGCACATTGGTGTAAACAAATTATGAATGAAGGGTGCCTAAAAGGGGATCTTTTTAATGAATCACGAGATGCATTGGTAAATATACTTTCATGTATTAGGGCTCATAGTGGGGATAATAACATGATGGAGGGGCATGCGGAATACATGTACGAAGACCTTGCAAAGAATGGAAGTACTGAGATAGAGACCACAAGGAAGCCTAAGCATTGCAGCTACTGTCGCAAGGGGGGTCATAATATTGCTACGTGTTCCATGAGGAAAATGGATGAAAGGACTCCCCAATTTGATGATGACGCTGCGGAGAATGTTGATGGTGAAGACTACTCCTTCGTAGATGCTGAAAGTGATGAGTATGTTCACACTGAATGGTTTGAGGAGGAAGATGAATATTTAGATTTCTCAAGATATTATGAACAGAGTGGTGGCGAGACTGAGTCCTCAATGGATTACGATTCTGGTGGGGCAAATGATGATGATGAGGCAGAGTTGTGA 2646 0.421 MGLPHQLPPPTLLSTGLSIHRRRPAKPSPLPSNPSSSVVRRLSLPVSSSLFSLLSSLVEWLSALWCSIPPASSTSRVTMEPQTQEASNSQRHTSDQNVHNVSDHVDEDVTSDAVDMDQYRINSWEDIGKIDFSSLSMKNICQLHFADLGLAFEFYNSYAKTRGFSVRKSRSRIVDGKVREKAYVCSCEGYRLEKWNHMKNRVREPKPETRCGCMSKLHVFFDAVIESWVVRDFCDEHNHDLVVPKLARMLRSHKKMTEPDISQMNHMKEVGISIPNIFGSLASQCGEYENINFSIKDMHNQVAKQRRQLPDDLTSAMAYLEMLAARDRNLFYSVEKGREGVFRQIFWCDGRCQLDYDLFGDVLAFDATYKKNRYRLPVVIFSGVNHHNQTVVFGAAIVSNERKSTYVWLLKQLLIAMKGKIPTSVITDGHQSMAIAIREVFPNAHHRLCAWHLMRNATSNIHKPQFTKMFTKLMLGDYEVGVFEQKWEEMVGFFGVEDREWIADMYGKRNMWATAHIRGKFFAGFRTTSRCESLHAVLKRYVKSRHNLTEFVQHFQRCLSYMRHREDLADFKSSTGQPVMQTHFQQLERSAATIYTRQIFMLFRSMLHKASTLKVIYEKETSSCKIYQVSKFYKPNMIWHVSFHGEQDEFKCSCMRMDSIGIPCSHILAVLGFVDIAELPKSLVLRRWTRKAKEGISGYDDMGGLMEDSLAISRRACLAHWCKQIMNEGCLKGDLFNESRDALVNILSCIRAHSGDNNMMEGHAEYMYEDLAKNGSTEIETTRKPKHCSYCRKGGHNIATCSMRKMDERTPQFDDDAAENVDGEDYSFVDAESDEYVHTEWFEEEDEYLDFSRYYEQSGGETESSMDYDSGGANDDDEAEL 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02932 881 MobiDBLite consensus disorder prediction 73 96 - -
Aip05g02932 881 Pfam FAR1 DNA-binding domain 153 242 IPR004330 -
Aip05g02932 881 SMART 26again6 650 677 IPR006564 GO:0008270
Aip05g02932 881 MobiDBLite consensus disorder prediction 73 104 - -
Aip05g02932 881 Pfam MULE transposase domain 362 456 IPR018289 -
Aip05g02932 881 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 145 785 IPR031052 GO:0006355
Aip05g02932 881 PANTHER OS02G0262500 PROTEIN 145 785 - -
Aip05g02932 881 MobiDBLite consensus disorder prediction 852 881 - -
Aip05g02932 881 Pfam SWIM zinc finger 652 671 IPR007527 GO:0008270
Aip05g02932 881 ProSiteProfiles Zinc finger SWIM-type profile. 639 675 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02932 Aip-Chr5 130914896 130920534 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip05g02932 MULE 1.5e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02932 - - ahf:112719698 1630.92