Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02907 ATGTGGATGGTGGGTTACAATGAAGGTGGAGGTGGCGATCATCATCACCATCAGTTAAACATGGTTGTTGATCACCATCCTCATCATCACCATCATCATCCATTCGGAGCTTCTGGAAGGAAGCTAAGGCCTCTCATGCCAAGACCAATGACTTCTCCTAACAACTCAACAACAACGACAACAACAACAACCAATAACAACAACAACAACAACAACCCATGCTTAAGCCTTGTTCATAATCAGGGCAACGATTTCTTCTCTCAATATCACAACCATTTATCGACAGTGGGAGAGCAGAACAAGAGGGAAAATGGTAACAACAACAATAATGGTTCGGCACCGGTTGTGGTGAGTTCCCGGTGGAATCCAACGCCGGAGCAGCTGAGAGCGCTTGAGGAGCTGTACAGAAGAGGGACTCGAACGCCGTCGGCGGAGCAAATCCAACACATAACAGCGCAGCTGAGAAGGTTTGGCAAGATTGAGGGCAAGAATGTCTTTTACTGGTTTCAGAATCATAAGGCTAGGGAGAGGCAAAAGCGTCGCCGCCAGATGGAATCATCTGATAACACTAACAATAATCATAATCATCCACTTCAAAACAACAATCACCACCGTGATTTTGATTCTTCTTCTGAAAAGAAAGAACTGGCAGCAAGTAGGACAATGGTTGAAGTTGAACAGACCAAAAACTGGGCATCCTCTACAAACTGCACTACTCTTGCAGAGGAATCTGTTTCAATGGAAAGAGAGGGAGGAGCAGGAAAAGCAGGAGTGGCAGAGTGTAGAGCAGATGGATGGGTCCAATTCGAAGAAGGGGAATTACAACAAAGAAGGAACTTTATGGAAAGGAATGCCACGTGGCACATGATGATGCATCATCACTCCCCATGTGCTGCTGCTGCACCACCTGCACCTGCACCACCTGTCACACACCTCATAAATGCCCTTACTCCTCCTCCTCCTCCTCCTTCTTCCTCTCTTCCTCTTCTTCTTCCTCTTCAACCATCAAAGCTCATTAATAATAATAATAATCTCAGCTTCTTTATTTCATCAGAAAACAATTACAACAACACCACTCTTCTCCACTTAACCACCACTCGTAGCAATGAAGATGATGATGATTTTGTTGATAATAGTATTATTAACATTCATCATCATCATCAGAATGAGAATCAAACCCTTCAACTTTTCCCTCTAAGGAGCGGTGACGATCTTCATCATCACATTAACGGCAAAGGGACAGAGATATCAGCATCAAATGATGCCATCACCCCGAACCACCATCACTTCTTTGAGTTCCTTCCTTTGAAGAACAACTAA 1320 0.4424 MWMVGYNEGGGGDHHHHQLNMVVDHHPHHHHHHPFGASGRKLRPLMPRPMTSPNNSTTTTTTTTNNNNNNNNPCLSLVHNQGNDFFSQYHNHLSTVGEQNKRENGNNNNNGSAPVVVSSRWNPTPEQLRALEELYRRGTRTPSAEQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQMESSDNTNNNHNHPLQNNNHHRDFDSSSEKKELAASRTMVEVEQTKNWASSTNCTTLAEESVSMEREGGAGKAGVAECRADGWVQFEEGELQQRRNFMERNATWHMMMHHHSPCAAAAPPAPAPPVTHLINALTPPPPPPSSSLPLLLPLQPSKLINNNNNLSFFISSENNYNNTTLLHLTTTRSNEDDDDFVDNSIINIHHHHQNENQTLQLFPLRSGDDLHHHINGKGTEISASNDAITPNHHHFFEFLPLKNN 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02907 439 Gene3D - 117 179 - -
Aip05g02907 439 SUPERFAMILY Homeodomain-like 119 184 IPR009057 -
Aip05g02907 439 MobiDBLite consensus disorder prediction 199 220 - -
Aip05g02907 439 ProSiteProfiles 'Homeobox' domain profile. 124 179 IPR001356 GO:0003677
Aip05g02907 439 MobiDBLite consensus disorder prediction 98 119 - -
Aip05g02907 439 Pfam Homeodomain 119 178 IPR001356 GO:0003677
Aip05g02907 439 SMART HOX_1 116 183 IPR001356 GO:0003677
Aip05g02907 439 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 64 438 - -
Aip05g02907 439 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 64 438 IPR044555 GO:0003700|GO:0099402
Aip05g02907 439 CDD homeodomain 120 180 IPR001356 GO:0003677
Aip05g02907 439 MobiDBLite consensus disorder prediction 50 69 - -
Aip05g02907 439 MobiDBLite consensus disorder prediction 172 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02907 Aip-Chr5 130560075 130562845 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02907 1 438 Wox Gene Family AT3G18010 34.910 1.10e-55 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Aip05g02907 Homeodomain 1.7e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02907 - - adu:107490490 707.212