Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02897 ATGGCCCTCGATACTGCCCGAGGAATAAACCATTTGCACAACTGCACTCCAGTGATTGTACACCGTGATTTGAAGTCACTAAATCTTCTTGTTGATAAAAATTGGGTTGTGAAGTTATGTGATTTTGGCTTATCAAGAATGAAGCACATTACATTCCTTTCTTCCAGATTAACTGCAGGAACACCCTGGGGTGGAATGAATCCGATGCAAGTTGTGGGTGCTGTCGGTTTCCAGCATTGTTGCCTTGTCATTACAGATGATATGGACCCTGCTATCACGGATATTATCAATCAATGCTAG 300 0.4233 MALDTARGINHLHNCTPVIVHRDLKSLNLLVDKNWVVKLCDFGLSRMKHITFLSSRLTAGTPWGGMNPMQVVGAVGFQHCCLVITDDMDPAITDIINQC 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02897 99 ProSiteProfiles Protein kinase domain profile. 1 99 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g02897 99 PANTHER SERINE-THREONINE PROTEIN KINASE 61 99 - -
Aip05g02897 99 Pfam Protein kinase domain 2 47 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g02897 99 PANTHER PUTATIVE, EXPRESSED-RELATED 1 62 - -
Aip05g02897 99 Gene3D Transferase(Phosphotransferase) domain 1 1 78 - -
Aip05g02897 99 ProSitePatterns Serine/Threonine protein kinases active-site signature. 19 31 IPR008271 GO:0004672|GO:0006468
Aip05g02897 99 SUPERFAMILY Protein kinase-like (PK-like) 1 99 IPR011009 -
Aip05g02897 99 PANTHER PUTATIVE, EXPRESSED-RELATED 61 99 - -
Aip05g02897 99 PANTHER SERINE-THREONINE PROTEIN KINASE 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02897 Aip-Chr5 130398787 130400572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02897 1 99 MAP Kinase Kinase Kinase AT1G73660 56.716 7.24e-45 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Aip05g02897 Pkinase 2.3e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02897 - - gmx:100816332 161.77