Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02886 ATGAAGCACAGTACATTCCTTTCTTCCAGATCAACTGCAGGAACAGCTGAGTGGATGGTGCCTGAAGTGTTAAGAAATGAACCTTCAAATGAAAAGTGCGATGTTTATAGCTTTGGAGTCACATTATGGGAGCTCTCTACTTTGCAGCAGCCCTGGGGTGGAATGAATCGGATGCAAGTTGTGGGTGCTGTCGGTTTCCAGCATTGTTGTCTTGTCATTACAGATGATATGGAGCCTGCTATCACGGATATTATCAAGCAATGCTGGCAGAGGTGA 276 0.4529 MKHSTFLSSRSTAGTAEWMVPEVLRNEPSNEKCDVYSFGVTLWELSTLQQPWGGMNRMQVVGAVGFQHCCLVITDDMEPAITDIIKQCWQR 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02886 91 Gene3D Transferase(Phosphotransferase) domain 1 1 91 - -
Aip05g02886 91 Pfam Protein tyrosine and serine/threonine kinase 4 90 IPR001245 GO:0004672|GO:0006468
Aip05g02886 91 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 90 - -
Aip05g02886 91 ProSiteProfiles Protein kinase domain profile. 1 91 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g02886 91 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 1 90 - -
Aip05g02886 91 SUPERFAMILY Protein kinase-like (PK-like) 8 90 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02886 Aip-Chr5 130275082 130276532 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02886 1 90 MAP Kinase Kinase Kinase AT1G73660 76.667 3.86e-46 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Aip05g02886 PK_Tyr_Ser-Thr 4.6e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02886 - - aip:107644137 177.563