Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02884 ATGATTATAACAAGTGGTGATTGGATATCCAGGTGCGATGTTTATAGCTTTGGAGTCATATTATGGGAGCTCTCTACTTTGCAACAGCCCTGGGGTGGAATGAATCCGATGCAAGTTGTGGGTGCTGTCGGTTTCCAGCATTGTTGCCTATTTGCCTTGTCATTGCAGATGATATGGACCCTGCTATCACGGATATTATCAAGCAATGCCGTCAGACGTGAGTGTACTCTTCAATCATTTTATCCTTATTCTAAGATATCAGAACTCTTGCTTATAGCATTCTGA 285 0.4211 MIITSGDWISRCDVYSFGVILWELSTLQQPWGGMNPMQVVGAVGFQHCCLFALSLQMIWTLLSRILSSNAVRRECTLQSFYPYSKISELLLIAF 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02884 94 Pfam Protein tyrosine and serine/threonine kinase 7 43 IPR001245 GO:0004672|GO:0006468
Aip05g02884 94 PANTHER PUTATIVE, EXPRESSED-RELATED 6 48 - -
Aip05g02884 94 SUPERFAMILY Protein kinase-like (PK-like) 11 73 IPR011009 -
Aip05g02884 94 PANTHER SERINE-THREONINE PROTEIN KINASE 6 48 - -
Aip05g02884 94 Gene3D Transferase(Phosphotransferase) domain 1 2 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02884 Aip-Chr5 130250116 130250400 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02884 11 47 MAP Kinase Kinase Kinase AT1G18160 89.189 3.82e-20 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Aip05g02884 PK_Tyr_Ser-Thr 8.6e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02884 - - aip:107644121 125.561