Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02862 ATGCAGTGGACATTCTCAAACAAAGTCTCAGCCATTCCTCAGTACTTGTCCTTCAAGACGACACTGGAAGATCAGAGAAAGACAATTATGGATCCCCTAGCTTCATCTGGATATATGACCATATCAACTAAGGATGCTTATGACACTGACCAGAAACCATTGTTTAGTGTGGTCCAGAGGAATTTATCCATAGGAAAGCAAGCCGGAAACAACATTGGAATGACAGTGTATCCACCGCCATGTTCTGGTTCACATTTAGCTAGCCAACAACAGGAATCAAGAATATTTTCACTTTCCAACCAAACAAATAAAGTAAGTCCTGTTCTTCAATCTAACCTTGCTACTACTACCGGACATAGCATGGTTGCTTCAGTTATAAAACCACAAGCACTCGGTTCCAAATCAACCAGCACACCTGTATCTGCTCTTCCATCTGCGAGTTCCATTGTTGGAACTACCGAGTTAAGGAATTGTTCCAAGTCTTCTGGGACACCTACTCAGCTGACCATTTTCTATGCCGGTTCAGTATGTGTTTATGATGACATATCTCCTGAGAAGGCCCAGGCTATCATGTTACTTGCTGGAAATGGCTCTGCTCTAAATCAGAACAACACAGTTTCTACAACTAAATTGCAGCCAGCAATGTCTGTTCCCTCCAAAGATAATGGTTTCATTGTAGGCATGCCAATTCCTCTTCCATTGACTTCTCTCACCGTTTCTCGTCCTGGAGGAGCGTCGGTGGCAGTTGGATCTTCGACTACCTCTACCAACAATTTGGAATCTCCTAATGTTGTTTCAATAAGATCTGCATCTCAAAAAATGGTTAACACAGTAGGGTTGCCTCAGGCACGCAAAGCATCGTTGGCTCGGTTCTTGGAGAAGCGAAAGGAAAGGGTTATGAGCACATCTCCCTACACTTTAAGCAAGAAATCTTCCCCTGAAAGCAGCAATCCTGGATCAGATACTATTAGTCTTTCCATGAACTCCTCCGGTTCCTGTTCGCTACCAGCCATTAACTAA 1020 0.4343 MQWTFSNKVSAIPQYLSFKTTLEDQRKTIMDPLASSGYMTISTKDAYDTDQKPLFSVVQRNLSIGKQAGNNIGMTVYPPPCSGSHLASQQQESRIFSLSNQTNKVSPVLQSNLATTTGHSMVASVIKPQALGSKSTSTPVSALPSASSIVGTTELRNCSKSSGTPTQLTIFYAGSVCVYDDISPEKAQAIMLLAGNGSALNQNNTVSTTKLQPAMSVPSKDNGFIVGMPIPLPLTSLTVSRPGGASVAVGSSTTSTNNLESPNVVSIRSASQKMVNTVGLPQARKASLARFLEKRKERVMSTSPYTLSKKSSPESSNPGSDTISLSMNSSGSCSLPAIN 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02862 339 MobiDBLite consensus disorder prediction 301 339 - -
Aip05g02862 339 Pfam Jas motif 281 305 IPR018467 -
Aip05g02862 339 MobiDBLite consensus disorder prediction 300 339 - -
Aip05g02862 339 SMART tify_2 161 196 IPR010399 -
Aip05g02862 339 Pfam tify domain 164 195 IPR010399 -
Aip05g02862 339 ProSiteProfiles Tify domain profile. 161 196 IPR010399 -
Aip05g02862 339 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 228 339 IPR040390 -
Aip05g02862 339 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 231 IPR040390 -
Aip05g02862 339 PANTHER JASMONATE ZIM-DOMAIN PROTEIN 1 231 - -
Aip05g02862 339 PANTHER JASMONATE ZIM-DOMAIN PROTEIN 228 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02862 Aip-Chr5 130012540 130017722 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02862 1 323 Tify Gene Family AT3G17860 40.176 3.55e-54 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Aip05g02862 tify 3.4e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02862 K13464 - gmx:100807288 383.259