Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02859 ATGGCTTCTTGCAAGAAATTCCCGTCGCCAACAGGAAAAAGCCCAAAAGAAGCTGATCAGTTGAAGGAGCATGGTTATGGAAAGGTTGAACCACCGAAAACTTCAAGTAGTAAGAGATTCAGTTCCGATGGTGATCTTTCTTCTGCTAAGCCACCTGAGCTTCTTCCTGCCAAAGATTCCCAGGATCATGCTTCCAAGCACCACCATAAAGTTTCCTGGGGATACTGGGGAGATCAGCAGAATAATAGTGAGGAAAGCTCAATAATTTGTCGTATATGTGAGGAAGAAGTAGCTACTTCACATGTTGAGGATCATTCAAGGATTTGTTTAGTTGCTGATCGATGTGATCAGAAAGGTCTGAGTGTTAATGAACGTCTTGTTAGAATCGCTGAAACACTAGAAAAGATGGAGTCATGTACACAAAAGGATACCCAACAAATAGTGGGAAGTCCAGATGTTGCAAAAGTGTCAAATTCAAGCATGACTGAAGAATCTGATGTAGTTTCCCCTAAACTTAGTGATTGGTCTCGCAGAGGATCAGAGGATATGCTAGACTGTTTCCCTGAAGATGATAATTCTGTGTTTATGGATGACCTAAAGGGTTTACCACTTATGTCATGTAAAACTCGTTTTGGTCCGAAGTCTGAGCAAGGTATGACAACATCATCTGCAGGGAGCATGACTCCTAGGTCTCCTTTAATGACACCAAGGACAAGTCAGATTGAAATGCTCTTGGCAGGAAAGGGTGCTTACTCCGAACATGATGATCTGCCACAGATGAATGAACTTGCTGATATAGCACGCTGTGTCGCAAACGCACCTCTGGATGATGATCGCTCAACATCATATTTATTATCTTGTCTTGATGACTTACGAGTTGTTGTAGACCGGAGGAAATTTGATGCACTTACTGTGGAGACCTTTGGAACACGTATCGAGAAGCTGATACGTGAGAAGTATTTGCAGCTTACTGAGATGGTGGATGTAGAAAAGATAGATATGGAGAGCACTGTAATGGATGATGATGTCATCTTGGAAGATGATGTGGTCCGTAGCTTGAGAACAAGCCCAATCCATTCTTCAAGGGACCGTACCTCTATTGATGACTTTGAGATCATAAAGCCTATAAGTCGTGGGGCATTTGGACGGGTTTTCCTGGCCAAAAAGAGAACAACTGGTGATCTTTTTGCAATTAAGGTTCTGAAGAAGGCTGACATGATTCGTAAGAATGCTGTGGAAAGTATATTAGCAGAACGTGATATCTTAATTACAGTTCGGAATCCTTTTGTGGTTCGTTTCTTCTATTCTTTCACATGCCGTGAGAACTTGTATCTTGTCATGGAGTATCTTAATGGAGGTGACCTATATTCGTTATTAAGGAATTTAGGTTGCTTAGACGAGGAAGTTGCTCGCGTGTATATTGCTGAAGTGGTTCTCGCATTAGAGTATTTGCATTCACTACGGGTGGTTCATCGAGACTTGAAACCTGACAATTTACTGATCGCCCATGATGGTCACATTAAGCTAACAGATTTCGGGCTTTCCAAAGTCGGTCTCATCAACAGCACGGATGATTTATCTGGTCCAGCAGTGAGTGGGACATCCTTGCTTGGGGAGGATGAGCCTAACATGTCTACATCTGAGCATCAAAGGGAACTGAGGAAGAAAAGATCTGCTGTAGGTACCCCTGATTATTTGGCGCCAGAGATTCTTTTGGGAACTGGACACGGGTATACGGCTGATTGGTGGTCTGTTGGGGTCATTTTATTTGAGTTGCTTGTTGGTCTTCCACCTTTTAATGCAGAGCATCCTCAGACTATATTTGATAATATTCTTAATCGTAAGATACCTTGGCCTGCAGTTCCTGAAGAAATGAGTCCTGAAGCTCAAGATCTTATTGATCGATTATTGACTGAAGATCCTAACCAAAGACTTGGAGCTAGAGGTGCATCAGAGGTGAAAGAACATGTTTTCTTTAAGGATATAAATTGGGACACACTTGCTAGACAGAAGGCTGCATTTGTTCCTGCTTCTGAGAGTGCTCTAGACACTAGTTACTTCACTTCTCGCTACTCATGGAATACTTCAGACGGTCTTGTATATCATGCAAGTGATGCTGAGGATTCTAGTGATGCTGATAGCTTAAGTGGTAGCAGTAGTTGCTTGAGCAATCGCCAAGATGAAGTGGGAGATGAATGTGGGGGTCTTGCTGAGTTTGATTCCAGCTCATCAGTCAACTACTCTTTTAGTAATTTCTCTTTTAAGAATCTCTCCCAGCTTGCATCAATCAACTATGATCTTCTCTCCAAGGGATGGAAAGATGATCCACCAGCAAATCCCGGAGCATAG 2349 0.4253 MASCKKFPSPTGKSPKEADQLKEHGYGKVEPPKTSSSKRFSSDGDLSSAKPPELLPAKDSQDHASKHHHKVSWGYWGDQQNNSEESSIICRICEEEVATSHVEDHSRICLVADRCDQKGLSVNERLVRIAETLEKMESCTQKDTQQIVGSPDVAKVSNSSMTEESDVVSPKLSDWSRRGSEDMLDCFPEDDNSVFMDDLKGLPLMSCKTRFGPKSEQGMTTSSAGSMTPRSPLMTPRTSQIEMLLAGKGAYSEHDDLPQMNELADIARCVANAPLDDDRSTSYLLSCLDDLRVVVDRRKFDALTVETFGTRIEKLIREKYLQLTEMVDVEKIDMESTVMDDDVILEDDVVRSLRTSPIHSSRDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILITVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEEVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTSLLGEDEPNMSTSEHQRELRKKRSAVGTPDYLAPEILLGTGHGYTADWWSVGVILFELLVGLPPFNAEHPQTIFDNILNRKIPWPAVPEEMSPEAQDLIDRLLTEDPNQRLGARGASEVKEHVFFKDINWDTLARQKAAFVPASESALDTSYFTSRYSWNTSDGLVYHASDAEDSSDADSLSGSSSCLSNRQDEVGDECGGLAEFDSSSSVNYSFSNFSFKNLSQLASINYDLLSKGWKDDPPANPGA 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02859 782 MobiDBLite consensus disorder prediction 707 727 - -
Aip05g02859 782 MobiDBLite consensus disorder prediction 527 557 - -
Aip05g02859 782 PANTHER SERINE/THREONINE-PROTEIN KINASE 52 781 - -
Aip05g02859 782 ProSiteProfiles AGC-kinase C-terminal domain profile. 660 764 IPR000961 GO:0004674|GO:0005524|GO:0006468
Aip05g02859 782 MobiDBLite consensus disorder prediction 210 233 - -
Aip05g02859 782 ProSitePatterns Serine/Threonine protein kinases active-site signature. 489 501 IPR008271 GO:0004672|GO:0006468
Aip05g02859 782 PANTHER SERINE/THREONINE PROTEIN KINASE IREH1-RELATED 52 781 - -
Aip05g02859 782 SUPERFAMILY Protein kinase-like (PK-like) 367 695 IPR011009 -
Aip05g02859 782 Gene3D Phosphorylase Kinase; domain 1 368 688 - -
Aip05g02859 782 Gene3D Transferase(Phosphotransferase) domain 1 454 677 - -
Aip05g02859 782 MobiDBLite consensus disorder prediction 152 169 - -
Aip05g02859 782 MobiDBLite consensus disorder prediction 152 174 - -
Aip05g02859 782 Pfam Protein kinase domain 370 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g02859 782 MobiDBLite consensus disorder prediction 1 66 - -
Aip05g02859 782 CDD STKc_MAST_like 376 664 - -
Aip05g02859 782 SMART serkin_6 370 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g02859 782 ProSiteProfiles Protein kinase domain profile. 370 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g02859 782 MobiDBLite consensus disorder prediction 213 233 - -
Aip05g02859 782 MobiDBLite consensus disorder prediction 710 726 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02859 Aip-Chr5 129914120 129920841 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02859 1 780 AGC Kinase Gene Family AT3G17850 74.680 0.0 1182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Aip05g02859 Pkinase 6.2e-66 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g02859 05 129914120 129920841 Aip05g02859 05 129914120 129920841 ECH