Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02858 ATGCATCGCAACAAGCTCATCATTCTCTTCTTCCTCGTCCTCCTTCCTTATGCCAAACCCGACCTCTCTTCCGCCCAACGAGCCGCACTCCTCAACCTACGCTCCGCCGTCGGAGGCCGCACGCTCCTCCTCTGGCTCCCAACCTCTACAACCTCCCCATGCAAGTGGCCTGGCATTCTCTGCGATCCAACCAACACCCATGTCGTCGCCCTCCGCCTCCCCGCCGCCTCACTCTCCGGCCACCTCCCCTCCGCCGTGTTTCCCTCCTTCACCCACCTCCGCACCCTCTCTTTCCGCTTTAACTCACTCTCCGGCCCCATTCCCGCCGACCTCTCCCTCTGCTCCTCCCTCCGCAACCTCTACCTCCACCATAACAACCTCTCCGGCGAGCTTCCACCTTCTCTCTTCAACCTCACCTCTCTCGTTCGCCTCAACCTGGCAGATAACGCCTTTTCAGGCCCGGTTCGAACCGGCTTCAACAATTTGACCCGCTTGAGGACCCTCTACCTCGAGAACAACCGGTTTTCCGGGTCGCTACCCGAGTTGAAAAGACTCGCCGAGTTGGCTCAGTTCAACGTTTCCAACAACTTTCTCAACGGTTCTGTGCCTGAAACGTTGACGGGCTTCTCAAAGGAGTCATTTTTAGGGAACACATTGTGTGGGAAGCCATTGAAGTTGTGTCCTCAGAATGAGAATGGGAGAAGGGCAAATGGGTCTTTTCCAGGCGTGGCTGCGGGTATTGCGAACAGTGGTTTGAAGGAGAAGAAGAAAGGAAAGCTAAGTGGTGGGGTCATTGCTGGGATTGTGATTGGGTGTGTGGTTGGAATGTTGCTAATTGTGTTTGCTTTGATTCTTCTGTGTAGGAAGAAGAGTGATAACAGAACCAGTAACATTGAAAATATTGCAACATTGAAGCAGGGTAATGGTAGGGGAATCCATGGTGAGAAAAATCATGTTTCTGAAGTAGAGACTGTCGGTGGTGGTGCGAACAAGAAGCTGGTTTTCTTTGGGAATTCAGAAGGGAAGGTGTTTGATTTGGAGGATTTGCTTAGAGCCTCTGCTGAGGTTTTAGGGAAGGGTACTTTTGGAACTTCATATAAGGCTGTGTTGGAGAATGGGCCTGTGGTGGCTGTGAAGAGGCTCAAGGATGTGACACTCTCTGAGAGTGACTTCAGGGATGAGATTGAGGTTGCTGGAGCAATGGTTCATCAGAATTTGGTGCCTCTTAGGGCTTACTATTATAGCAGGGATGAGAAGCTTCTTGTTCATGATTATATGCATATGGGAAGCTTGTCTGCACTCTTGCATGGAAACAAAGGAGCTGGCAGAACACCACTGACTTGGGAACTCAGGTCAGGGATTGCGCTTGGAGCTGCTCGCGCCGTTGAGTACCTACATTCACAAGGGCCTAATGTATCTCATGGAAACATAAAGTCATCAAACATCCTCCTAACCAAGAACTATGAAGCCAGAGTATCCGACTTTGGCCTTGCACAACTTGTTAGCCCCTCGTCGACCCCTAATAGGATTGCCGGCTACCGTGCTCCTGAGGTAACTGATCCTCGCAGAGTGTCTCACAAGGCTGATGTGTACAGCTTTGGCGTGGTGCTCTTGGAGCTTCTTACCGGAAAGGCTCCAACTCACGCCTTGTTGCATGAGGAAGGAGTGGACCTTCCGAGATGGGTGCAATCGGTTGTTAGGGAAGAGTGGACTTCTGAGGTCTTTGATGCTGAGCTCCTTAGCCATCAGACTGTGGAAGAGGATATGGTTGAGTTGTTGCAGCTTGCAGTGGATTGTACAGCTCCATATCCCGATAATCGACCTTCAATCGCCGAAGTGAGACACCGGATAGAAGAGCTTCATGGTTCTAAGGATCTAAAGCAAACCCAGCACCAACATGATTTGATCAGTGTTGTAGATGATGTATCTTGA 1932 0.5093 MHRNKLIILFFLVLLPYAKPDLSSAQRAALLNLRSAVGGRTLLLWLPTSTTSPCKWPGILCDPTNTHVVALRLPAASLSGHLPSAVFPSFTHLRTLSFRFNSLSGPIPADLSLCSSLRNLYLHHNNLSGELPPSLFNLTSLVRLNLADNAFSGPVRTGFNNLTRLRTLYLENNRFSGSLPELKRLAELAQFNVSNNFLNGSVPETLTGFSKESFLGNTLCGKPLKLCPQNENGRRANGSFPGVAAGIANSGLKEKKKGKLSGGVIAGIVIGCVVGMLLIVFALILLCRKKSDNRTSNIENIATLKQGNGRGIHGEKNHVSEVETVGGGANKKLVFFGNSEGKVFDLEDLLRASAEVLGKGTFGTSYKAVLENGPVVAVKRLKDVTLSESDFRDEIEVAGAMVHQNLVPLRAYYYSRDEKLLVHDYMHMGSLSALLHGNKGAGRTPLTWELRSGIALGAARAVEYLHSQGPNVSHGNIKSSNILLTKNYEARVSDFGLAQLVSPSSTPNRIAGYRAPEVTDPRRVSHKADVYSFGVVLLELLTGKAPTHALLHEEGVDLPRWVQSVVREEWTSEVFDAELLSHQTVEEDMVELLQLAVDCTAPYPDNRPSIAEVRHRIEELHGSKDLKQTQHQHDLISVVDDVS 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02858 643 Pfam Leucine rich repeat N-terminal domain 24 62 IPR013210 -
Aip05g02858 643 Gene3D Ribonuclease Inhibitor 25 136 IPR032675 -
Aip05g02858 643 PANTHER OS05G0588300 PROTEIN 6 328 - -
Aip05g02858 643 PANTHER OS05G0588300 PROTEIN 323 643 - -
Aip05g02858 643 Gene3D Transferase(Phosphotransferase) domain 1 426 642 - -
Aip05g02858 643 Gene3D Ribonuclease Inhibitor 137 225 IPR032675 -
Aip05g02858 643 Gene3D Phosphorylase Kinase; domain 1 315 425 - -
Aip05g02858 643 CDD STKc_IRAK 357 620 - -
Aip05g02858 643 SUPERFAMILY Protein kinase-like (PK-like) 355 617 IPR011009 -
Aip05g02858 643 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 323 643 - -
Aip05g02858 643 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 6 328 - -
Aip05g02858 643 ProSiteProfiles Protein kinase domain profile. 351 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g02858 643 Pfam Protein kinase domain 354 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g02858 643 ProSiteProfiles Leucine-rich repeat profile. 164 186 IPR001611 GO:0005515
Aip05g02858 643 SUPERFAMILY L domain-like 39 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02858 Aip-Chr5 129908179 129911425 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02858 24 623 Receptor kinase-like Gene Family AT3G17840 61.058 0.0 705
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aip05g02858 Pkinase 9.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02858 - - gmx:100781597 794.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04447 03 128777936 128780784 Aip05g02858 05 129908179 129911425 PCT