Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02856 ATGCTTTCAAAGGCTGTTGCAACAGAGTGCCAGACTACATTTTTTAATATTTCAGCATCATCTGTTGTGTGCAAATGGCGAGGTGATTCCGAGAAGTTGATAAATGTGTTATTTGAGCTTGCAAGACGCCATGCCCCCTCAACCATATTTCTTGATAAAATTGATGAAATCATTAGTCAACGCGGTGAAGCACGCAGTGAACATGAAGCAATTTTTAAACCTGTATTTGATTTGTCATTCAGTTATTATGCTATTCATGCTGCTGAACTCTCCTCAGATGACACATTATTTTATTTTACGGCTTGCACTGTGCTTGCTGTTTTTGCAATGGCTACAAGCCTGAGGATGTACACAGCTTGCCAGCATCTTCAAGCTCAGGCCAGGGCTCATGCAGCAGCAACAACTGGATGGCTTAACCATACCGAATTATGGCTTCATGTGCCACCATCCATAGAGTTTGTTCTATATGAATTTCCAAATATATGA 486 0.4074 MLSKAVATECQTTFFNISASSVVCKWRGDSEKLINVLFELARRHAPSTIFLDKIDEIISQRGEARSEHEAIFKPVFDLSFSYYAIHAAELSSDDTLFYFTACTVLAVFAMATSLRMYTACQHLQAQARAHAAATTGWLNHTELWLHVPPSIEFVLYEFPNI 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02856 161 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 69 IPR027417 -
Aip05g02856 161 PANTHER AAA DOMAIN-CONTAINING 1 72 - -
Aip05g02856 161 CDD AAA 1 57 - -
Aip05g02856 161 Pfam ATPase family associated with various cellular activities (AAA) 1 68 IPR003959 GO:0005524|GO:0016887
Aip05g02856 161 Gene3D - 1 66 IPR027417 -
Aip05g02856 161 PANTHER KATANIN P60 ATPASE-CONTAINING SUBUNIT A-LIKE 2 ISOFORM X1 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02856 Aip-Chr5 129822048 129823878 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02856 2 67 Calmodulin-binding Proteins AT3G56690 27.273 6.75e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02856 K07767 - ahf:112750922 132.88