Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02848 ATGTGTTTGAGATCATTCAGGTGCAGTTTTTGCTGCATCTTCGTCACACTCTACACCTTATTCCTGTGCTTCATTCTATCTATATTCCTATTTTGGATAATCATATCTCCATCAAGTGTCAAATTCCAAGTAACCAATGCTTCCCTCACTCAATTCAATCTCACCAACAACAACACCACATTGAACTACAAATTCAAAGTCAACATCACAGCAAGAAACCCTAACAACAACGTGGTGGTGTACTATAGGAGGATCACCGCATACGCGTGGTACAAAGACAGGAATTTCGCTGCCGTCAACTTGGCGCCATTTGATCAAGGTCACAAGAACACGACCCTCCTTCAAGAAGCCGTGTTCGAAGGACAAAACTCGATTCGACTCGGCTCAAAGCAAATCGCTGAGTACAACATGGAGAGGAGTGTGGGCATTTTCAATGACTTGGCCGTCGATTTGGATGTTAGAATAAGGGCTAAGTTTGGGAGGTTCAAGAGCAGCCGATTCAATCCACCGGTTGTTCAGTGTCGCCGGCTCAGGGTTCCTTTGATTTCGAATGGTAAACCGCCGGCAGCAACTTTTAGTGTTACAAGGTGCAGAAGTAGTAATTTCTTTCAAGATCGTGATGCCGAAGCCGGATAA 636 0.4465 MCLRSFRCSFCCIFVTLYTLFLCFILSIFLFWIIISPSSVKFQVTNASLTQFNLTNNNTTLNYKFKVNITARNPNNNVVVYYRRITAYAWYKDRNFAAVNLAPFDQGHKNTTLLQEAVFEGQNSIRLGSKQIAEYNMERSVGIFNDLAVDLDVRIRAKFGRFKSSRFNPPVVQCRRLRVPLISNGKPPAATFSVTRCRSSNFFQDRDAEAG 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02848 211 Pfam Late embryogenesis abundant protein 68 167 IPR004864 -
Aip05g02848 211 PANTHER HARPIN-INDUCED 1 19 202 - -
Aip05g02848 211 PANTHER OS05G0367900 PROTEIN 19 202 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02848 Aip-Chr5 129764838 129765553 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02848 34 181 SNARE and Associated Proteins AT1G32270 31.757 2.91e-16 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02848 - - gmx:100784278 261.922