Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02847 ATGTGTTTGAGATCATTCAGGTGCAGTTTTTGCTGCATCTTCGTCACACTTTTCACCTTATTCCTGTGCTTCATTCTATCCATATTCCTATTTTGGATAATCATATCTCCGTCAAGTGTCAAATTCCAAGTAACCAATGCTTCCCTCACTCAATTCAATCTCACCAACAACAACACCACATTGAAATACAAATTCAAAGTCAACATCACAGCAAGAAACCCTAACAACAACGTGGTGGTGTACTATAGGAGGATCACCGCATATGCGTGGTACAAAGACAGGTATTTTGCTACCGTAAACTTGGCGCCATTTGATCAAGGCCACAAGAACACGACCCTCCTTCAAGAAGCCGTGTTTGAAGGACAAAGCTCGATTCGACTCGGGCCAAAGCAAATTGCTGAGTACAACATGGAGAGGAGTGTGGGCATTTTCAATGACTTGGCCGTCGATTTGGATGTTACGATAAGGGCTAAGTTTGGGAGGTTCAAGAGCGGCCGGTTCGATCCTCAGTTTGTTAAGTGTCGCCGGCTCAGGGTTCCTTTGATTTCGAATGCTAAACCGACGGCAACATTCAATGTTAGAAGGTGCAGTAGTCCTTATTTCTTTCAGGATCGGGATGATGAGGGATAG 630 0.4429 MCLRSFRCSFCCIFVTLFTLFLCFILSIFLFWIIISPSSVKFQVTNASLTQFNLTNNNTTLKYKFKVNITARNPNNNVVVYYRRITAYAWYKDRYFATVNLAPFDQGHKNTTLLQEAVFEGQSSIRLGPKQIAEYNMERSVGIFNDLAVDLDVTIRAKFGRFKSGRFDPQFVKCRRLRVPLISNAKPTATFNVRRCSSPYFFQDRDDEG 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02847 209 PANTHER HARPIN-INDUCED 1 19 200 - -
Aip05g02847 209 PANTHER OS05G0367900 PROTEIN 19 200 IPR044839 GO:0098542
Aip05g02847 209 Pfam Late embryogenesis abundant protein 68 159 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02847 Aip-Chr5 129759316 129759945 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02847 34 181 SNARE and Associated Proteins AT1G32270 30.405 3.31e-15 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02847 - - ahf:112749063 264.233