Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02846 ATGATAGCAGTTTGGATTTCTGCTACAAAAAGAACTAATATAGCGGCGGTTAGTTTCCCTCCTGCTGCAAATCAAACCAAGAAGAGAGCCAACGGCCCTAAGTGCCCCGTCACTCACTCGACTAGATTGCCGCCGCGACCATCTTCTTCCCCTCCTCACAACCTCGCACTGTGGCTCTCTAGCTCGCCCCTGCCTTCCTCATTCCCAGTGACAGAATCAGAACAGAGGCACTCTAGTTCCAGCGAGTTCAGACGCAGCAGCGGCTGGTCACTGCCACTGCATCCCTTTCTCCTGAGTTCTTGCTCTGTCCTTCGACTCAGACAATGCTTGCAAAGGCTGTTGCAACAGAGTGCCAGACTACATTTTTTAATATTTCAGCATCTAGAATTATTCTTTTATTATGCTATTCATACTGCTGAACTCTCCTCAGATGACACATTATTTTATTTTACGGCTTGCATTGTGCTTGCTGTTTTTGCAATGGCTACAAGCCTGAGGATGTACACAGCTTGTCAGCATCTTCAAGCTCAGGCCAGGGCTCATGCAGCAGCAACAACTGGATTGCTTAGCCATACCGAATTATGGCTTCATGTGCCACCATCCATAGAGTTTGTTCTATATGAATTTTCCAAATATATGAAGAGATTACAAGCATAA 657 0.4612 MIAVWISATKRTNIAAVSFPPAANQTKKRANGPKCPVTHSTRLPPRPSSSPPHNLALWLSSSPLPSSFPVTESEQRHSSSSEFRRSSGWSLPLHPFLLSSCSVLRLRQCLQRLLQQSARLHFLIFQHLELFFYYAIHTAELSSDDTLFYFTACIVLAVFAMATSLRMYTACQHLQAQARAHAAATTGLLSHTELWLHVPPSIEFVLYEFSKYMKRLQA 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02846 218 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 141 204 - -
Aip05g02846 218 MobiDBLite consensus disorder prediction 23 52 - -
Aip05g02846 218 PANTHER TARGET OF ERK KINASE MPK-1 141 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02846 Aip-Chr5 129753810 129756993 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02846 154 202 C3H Transcription Factor Family AT3G55530 71.429 2.02e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02846 K16283 - adu:107471161 98.2117