Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02839 ATGATAAACGGGCTATGCAAAGAGGGTATACTTGATGAAGCATTGGCCTTAAAGTTGGAAATGGAAGACAATGGTTGCCCTCTGGATGCTGCCGAGTGGATGGCGCCTGAAGTGTTAAGAAATGAACCTTCAAATGAAAAGTGCGATGTTTATAGCTTTGGAGTCATATTATGGGAGCTCTCTACTTTGCAACAGCCCTGGGGTGGAATGAATCCGATGCAAGTTGTGGGTGCTGTCGGTTTCCAGCATTGTCGCCTTGTCATTCCAGATGATATGGACCCTGCTATCATGGAGACATGGATATTATCAAGCAATCCTGAAAGACATGAAGATCCAAAGTTGAGACCTACATTTGCTGAAATAATGGCAGCGCTGAAGCCGATCATTGGTTCTCAATCTCAAGTGCCGAAACCGGGTAGGCATGAGAAGGCTCAGTCATCAAGAGTTGGTGCAGACTCAGCAGGATAG 468 0.4594 MINGLCKEGILDEALALKLEMEDNGCPLDAAEWMAPEVLRNEPSNEKCDVYSFGVILWELSTLQQPWGGMNPMQVVGAVGFQHCRLVIPDDMDPAIMETWILSSNPERHEDPKLRPTFAEIMAALKPIIGSQSQVPKPGRHEKAQSSRVGADSAG 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02839 155 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1 28 IPR002885 -
Aip05g02839 155 TIGRFAM PPR: pentatricopeptide repeat domain 1 30 IPR002885 -
Aip05g02839 155 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 29 152 - -
Aip05g02839 155 Gene3D Transferase(Phosphotransferase) domain 1 7 151 - -
Aip05g02839 155 Pfam Protein tyrosine and serine/threonine kinase 30 125 IPR001245 GO:0004672|GO:0006468
Aip05g02839 155 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 29 152 - -
Aip05g02839 155 MobiDBLite consensus disorder prediction 130 155 - -
Aip05g02839 155 ProSiteProfiles Protein kinase domain profile. 1 129 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g02839 155 SUPERFAMILY Protein kinase-like (PK-like) 32 130 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02839 Aip-Chr5 129548184 129552156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02839 30 138 MAP Kinase Kinase Kinase AT1G73660 64.957 2.93e-42 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Aip05g02839 PK_Tyr_Ser-Thr 4.1e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02839 - - adu:107490486 203.371