Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02830 ATGTTGCAGGCCGAGTGGATGGCGCCTGAAGTGTTAAGAAATGAACCTTCAAATGAAAAGTGCGATGTTTATAGCTTTGGAGTCATATTATGGGAGCTCTCTACTTTGCAACAGCCCTGGGGTGGAATGAATCCGATGCAAGTTGTGGGTGCTGTCGGTTTCCAGCATTGTCGCCTTGTCATTCCAGATGATATGGACCCTGCTATCATGGAGACATGGATATTATCAAGCAATCCTGAAAGACATGAGTGTACTCTTCAATCATTTTATCCTTGTTCTAAGATATCAGAACTCTTGCTTATAGCATTCTGA 312 0.4295 MLQAEWMAPEVLRNEPSNEKCDVYSFGVILWELSTLQQPWGGMNPMQVVGAVGFQHCRLVIPDDMDPAIMETWILSSNPERHECTLQSFYPCSKISELLLIAF 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02830 103 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 4 70 - -
Aip05g02830 103 Pfam Protein tyrosine and serine/threonine kinase 3 72 IPR001245 GO:0004672|GO:0006468
Aip05g02830 103 Gene3D Transferase(Phosphotransferase) domain 1 2 88 - -
Aip05g02830 103 ProSiteProfiles Protein kinase domain profile. 1 103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g02830 103 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 4 70 - -
Aip05g02830 103 SUPERFAMILY Protein kinase-like (PK-like) 4 71 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02830 Aip-Chr5 129374657 129375216 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02830 4 71 MAP Kinase Kinase Kinase AT1G73660 83.824 1.28e-35 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Aip05g02830 PK_Tyr_Ser-Thr 9.7e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02830 - - aip:107644121 220.705