Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02802 ATGGAATCTAATAAGAGGAATAGTGTTAATAATAATAGCCAGAACTACCAACAACAACATCAACAAGAACAATTTCAATTTGAAGAGGAACATGAACAGGAACAAGATCAAGAAGAAGCATGTTATGAAGAAGAAGAAGAGGAAGATCAAGATGATGAAAAAAATAATGAGATCCTCAAGAGAAGAATCTCTAATCACCCTCTCTATGGACTCTTGGTTGAAGCTCACTTGGAGTGTTTGAAGGTTGGTGACATATCGAACTTGGACAGACAGCTGAAGATAGATCCAATGCAAGCAATGAAGCAACAAAACTTGAACATGTTCAGCCAATCAGAGCTTGATATCTTCATGGAAGCATATTGCATGGCACTTGGGAAGCTGAAAGAAGCAATGGAGGAACCGCAACAGAAGTCAATGGCTTTCATAAACAACATGCATTCACAACTCAGGGAGCTCACCACCAAGGCCACCGCCATGCCTCCTCCTTCTGAAGCTTCTGGTGCTTCTTCAAGTAGTGACTGCAAGTTCAGAAGAAACCCTAATATCTAG 549 0.4062 MESNKRNSVNNNSQNYQQQHQQEQFQFEEEHEQEQDQEEACYEEEEEEDQDDEKNNEILKRRISNHPLYGLLVEAHLECLKVGDISNLDRQLKIDPMQAMKQQNLNMFSQSELDIFMEAYCMALGKLKEAMEEPQQKSMAFINNMHSQLRELTTKATAMPPPSEASGASSSSDCKFRRNPNI 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02802 182 MobiDBLite consensus disorder prediction 29 53 - -
Aip05g02802 182 Pfam KNOX1 domain 59 83 IPR005540 GO:0003677|GO:0005634
Aip05g02802 182 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 38 155 - -
Aip05g02802 182 SMART KNOX1_2 57 97 IPR005540 GO:0003677|GO:0005634
Aip05g02802 182 Pfam KNOX2 domain 110 153 IPR005541 GO:0003677|GO:0005634
Aip05g02802 182 MobiDBLite consensus disorder prediction 1 54 - -
Aip05g02802 182 MobiDBLite consensus disorder prediction 155 182 - -
Aip05g02802 182 PANTHER FUSED COMPOUND LEAF 1 38 155 - -
Aip05g02802 182 SMART KNOX2_2 103 154 IPR005541 GO:0003677|GO:0005634
Aip05g02802 182 Coils Coil 28 62 - -
Aip05g02802 182 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02802 Aip-Chr5 128709316 128713486 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02802 57 152 Homeobox Transcription Factor Family AT4G08150 37.864 1.25e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02802 - - aip:107642073 262.692