Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02797 ATGGCCCTCGTTCGTCACCGCCGCCATCTTAATCTCCGCCTTCCCCTTCCAGAACCTTCCGAACGCTGTCCACGCTTTCCTCTCTCGCAAACCACAAACGCCGCCAAATCCTTCTCCGCCTCCTCCGGTGACGTTATCTTCCCCGGCGACATCGAGAAACTGGAAGTTCTCGGCCACGGCAACGGCGGCACAGTCTACAAAGTCCGCCATAAGCGAACCTCAGCGATCTACGCTCTCAAAGTCGTGCAATCCAGCTCCGACGCCACAACGCGCCGCCGCATCAGAACAGAAACCGAGATCCACAGCCGCGCCGCCGACTCACCGTACGTCGTTCGCTACCATGGCTCCTTCGAGAGCCCGCTCTCCGGCGACGTCGCCATCCTCATGGAGTACATGGACTCCGGCACGCTGGAAACTCTCTTGAAAACAAGAGGCACGTTTGACGAAGCCTCTCTGGCGAAAGTGGCGCGTGACGTTCTTAACGGTCTTAACTACCTCCACGCGCGCAACATCGTGCACCGTGACATAAAGCCCGCGAACCTCCTCGTGAATAACAAGAATGAGGTCAAGATAGGTGATTTTGGGGTAAGTAAGCTCATGTGCCGGACGCTTGACCCGTGCAAATCCTACGTCGGCACGTGCGCCTATATGAGCCCGGAGCGGTTCGACCCGGATGCATATGGCGGGAATTATAATGGATATGCCGCAGATATATGGAGCCTGGGCCTGACCCTTCTGGAACTTTACATGGGTCATTTCCCGTTGCTCCAAGAAGGTCAGAGGCCTGATTGGGCTACCCTAATGTGGGCAATTTGTTTTGGGGAGCGGCCGAGTTTGCCTGAAGGCGTCTCGACCGAGTTCCGTGACTTTGTTGAGTGTTGCCTCAAGAAGGACTCTAGTCAGAGATGGACGGCTCCTCAGCTCTTGACCCACCCGTTTCTTTCTAGGAATAACCCCGAACCTTAG 966 0.5621 MALVRHRRHLNLRLPLPEPSERCPRFPLSQTTNAAKSFSASSGDVIFPGDIEKLEVLGHGNGGTVYKVRHKRTSAIYALKVVQSSSDATTRRRIRTETEIHSRAADSPYVVRYHGSFESPLSGDVAILMEYMDSGTLETLLKTRGTFDEASLAKVARDVLNGLNYLHARNIVHRDIKPANLLVNNKNEVKIGDFGVSKLMCRTLDPCKSYVGTCAYMSPERFDPDAYGGNYNGYAADIWSLGLTLLELYMGHFPLLQEGQRPDWATLMWAICFGERPSLPEGVSTEFRDFVECCLKKDSSQRWTAPQLLTHPFLSRNNPEP 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02797 321 Gene3D Transferase(Phosphotransferase) domain 1 135 321 - -
Aip05g02797 321 ProSiteProfiles Protein kinase domain profile. 51 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g02797 321 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 2 317 - -
Aip05g02797 321 PANTHER SERINE/THREONINE-PROTEIN KINASE C01C4.3-RELATED 2 317 - -
Aip05g02797 321 ProSitePatterns Protein kinases ATP-binding region signature. 57 80 IPR017441 GO:0005524
Aip05g02797 321 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Aip05g02797 321 Gene3D Phosphorylase Kinase; domain 1 28 133 - -
Aip05g02797 321 Pfam Protein kinase domain 52 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g02797 321 CDD PKc_MAPKK_plant_like 50 314 - -
Aip05g02797 321 SUPERFAMILY Protein kinase-like (PK-like) 48 317 IPR011009 -
Aip05g02797 321 SMART serkin_6 51 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02797 Aip-Chr5 128607224 128608480 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02797 1 317 MAP Kinase Kinase Gene Family AT1G73500 63.091 6.98e-134 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Aip05g02797 Pkinase 1.7e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02797 K20604 - gmx:100804100 464.151