Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02780 ATGAATGGTAGAAGAGACACTTTAATTGCTATGGGAGCTTATCAACCCTCCTATTTGGCAACCAATAAAAATAGTGCAAGGGGCCAGATCCATCGCTTTCACTTGTCCTTGTGGTACGAGCATCTTGGCATATATAAAGAAACTTTCCTCAACCCTGAACTTGAAGGTTGTATTAGGAGGATCCATCAGCTTGCTCAAAACAATTGGAACAGATATACAGGACAACCATTATGCACTTGTGGCCACCTCCTGCGCTATCCCATTGACATTTCTCTTGATGGAAGTATCACACATGATCCTGAAATATTCCCCGACACCTATGCAAGAATTCGAGGTAGTCAACACTTAGATAGTTGGGTGGTTCGTAATATAAGGTGGGCGGGCACAAAAGCTGAGTTTAGTATTTTGTATTAG 414 0.4203 MNGRRDTLIAMGAYQPSYLATNKNSARGQIHRFHLSLWYEHLGIYKETFLNPELEGCIRRIHQLAQNNWNRYTGQPLCTCGHLLRYPIDISLDGSITHDPEIFPDTYARIRGSQHLDSWVVRNIRWAGTKAEFSILY 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02780 137 Pfam Phospholipase D C terminal 47 113 IPR024632 -
Aip05g02780 137 PANTHER PHOSPHOLIPASE D 1 116 IPR015679 -
Aip05g02780 137 PANTHER PHOSPHOLIPASE D ALPHA 3 1 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02780 Aip-Chr5 127974256 127974669 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02780 1 112 Phospholipase D Gene Family (Wang group) AT1G52570 52.586 4.61e-34 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02780 K01115 - ahf:112749031 285.034