Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02772 ATGCAGAATCAAAGAAACCCTCATGGCCTTGCCCTCCGCCTAGCCCTGCATGGTCGCCGACTAACACAGGTCCTCAGCGCCGACGCCGTCCCAGGTCCTCAGCACCGCAGCTTCTTCCTCCATCCTCGCCGCCTAACCCAGATCCTCCATCGTCACCGCCTGACGCATCTTGGTTTGAAGTTTGATTCCATCTTGTATTTGCAAATTTGCGGAATTTACACTATATGGTTGCTAATGGCAGAAGCTTACTCTGATGCTAATGGTGGAAATTTGTATATTGTTGAATGCTGTAGGCAGAATTTGAATATCTCTGAAGTTAAGTTGTTGTCGGATGAAGATGATCGTGAATATGGTTACGTGACTGGGTTGACTGCAGAGGATATAATGAAAAAGGTGTTTCAAAGTGAAGAGTGTGCATATGAGTTTTATGGTAGGTTAGGAAAATGCAATGGATTTGGGGTCCGTAAGGGAGACTATGCAAAGGATGAAGATGGGAGTGTAGTGAGAAGGAGGTTCTTCTGTAATCGGGCTGGCCTAAGGGATGGAAAACACTACAACAGACTAGACAGGAAGAGATGCCATAGGCCTGAGACACGCACGAATTGCCAGGCCCTGATGTCTGTATACCTTGATAAGGGTAGCTCGGTTTGGAAGGTTCAGAAAGTAATCCTCGAGCATAACCACGAGTTGATACCGATGGGAATGGTTCATATGATCCGAAGTTTCCGGGCGATATCGGGTTCTGCAAAGGCCCACATGGATGGAATGCATATGTATGGGTTGCCGACATCTAAGATATTGGGGTACATGGCTGGGATTGCGGGTGGTTATTCTTCTTTGGGTTTTACCGAGAAAGACGCATACAACTATATGGATCGGTCGAAGCGTGCAAAGGTGGTTGATGGAGACATGAACGTTGCTATAGTATACCTAGAAGGCAAGGCAGCTGCTGATCCCATGTCTATGGCCCGGTACAATTTGACTGAAGAAGGTATGTTGGGAAACATGTTCTGGGCAGATGGTCCTAGCAGGGTTGACTTTCAACACTTTGGAGACGTTGTTGCATTCGATTCGACATATAAGAAGAACAAGTACAATAGACCCCTTGTCATATTCTTAGGTTCAAACAATCACAAGCAAACAACAATTTTTGGTTTCGGTTTGGTTTTAGATGAGACAATCAGTTCATACAAGTGGATGTTGGAGAACTTGTTAGAAGTCATGTGTGGGAAGTTGTCCTCTGTAATCGTTACCGACGGGGATGAATCAATGATTGCTACAGTTAGGGAGGTATTGCCTCGGGCAACCCATAGGTTGTATGCATGGCATCTGCAGAAGAATGTGACCTCGAACACCAACGAGCAGATGTTCTGTGATTTCTTTGCCAAGTGGTTGTATGCTGACATGGAGGTTGAAGAGTTTGAGTGTGAATGGGCATAA 1440 0.4576 MQNQRNPHGLALRLALHGRRLTQVLSADAVPGPQHRSFFLHPRRLTQILHRHRLTHLGLKFDSILYLQICGIYTIWLLMAEAYSDANGGNLYIVECCRQNLNISEVKLLSDEDDREYGYVTGLTAEDIMKKVFQSEECAYEFYGRLGKCNGFGVRKGDYAKDEDGSVVRRRFFCNRAGLRDGKHYNRLDRKRCHRPETRTNCQALMSVYLDKGSSVWKVQKVILEHNHELIPMGMVHMIRSFRAISGSAKAHMDGMHMYGLPTSKILGYMAGIAGGYSSLGFTEKDAYNYMDRSKRAKVVDGDMNVAIVYLEGKAAADPMSMARYNLTEEGMLGNMFWADGPSRVDFQHFGDVVAFDSTYKKNKYNRPLVIFLGSNNHKQTTIFGFGLVLDETISSYKWMLENLLEVMCGKLSSVIVTDGDESMIATVREVLPRATHRLYAWHLQKNVTSNTNEQMFCDFFAKWLYADMEVEEFECEWA 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02772 479 Pfam FAR1 DNA-binding domain 141 231 IPR004330 -
Aip05g02772 479 Pfam MULE transposase domain 353 447 IPR018289 -
Aip05g02772 479 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 126 479 IPR031052 GO:0006355
Aip05g02772 479 PANTHER OS02G0262500 PROTEIN 126 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02772 Aip-Chr5 127736618 127739214 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip05g02772 MULE 5.5e-23 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02772 - - aip:107633916 603.979