Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02762 ATGGAAGGAGGAGTAGTACCATCGTCTTCTTCTTCCTCAGCATATAGAGAGTGCTTGAGGAACCATGCAGCCAGCCTCGGCAGCTATGCCACCGACGGCTGCGGAGAGTTCACCTTGGATGACATCAACGGTGGCAGCAACAGTCTGCAGTGTGCAGCATGTGGCTGCCACCGCAATTTTCATCGCAAGGTGAACAATTACCCTCAGAACGGAACGTCTCCTTCTGAGGGTACTGCAAACACGGCTCACGAGCTCATGAACTACTCAGAAGAGCGCGCCATAGCCGAAGAAGGCATAGAAAGAGGAATAATAATGGGAACTAATAATAATAATATTAATATTAATAGCAGCAGCAACAACAAAAAGAGGTTCAGGACGAAATTCAGCGAGGAGCAGAAGGAGAAGATGTTAGGGTTTGCGGAGAAGATTGGTTGGAAGCTTCAAAGAATTAGCAAAGAGACTGAAGATGAAGTTGAGAGGTTCTGTAGAAGTGTTGGTGTGAGTAGACAAGTTTTCAAGGTTTGGATGCATAACCACAAGAACAATTCTTCCTTTAATTCTTCTAATTCTGCTTCCAATGGCAATGCTTCATCTCTCACTCAGTAG 606 0.4538 MEGGVVPSSSSSSAYRECLRNHAASLGSYATDGCGEFTLDDINGGSNSLQCAACGCHRNFHRKVNNYPQNGTSPSEGTANTAHELMNYSEERAIAEEGIERGIIMGTNNNNININSSSNNKKRFRTKFSEEQKEKMLGFAEKIGWKLQRISKETEDEVERFCRSVGVSRQVFKVWMHNHKNNSSFNSSNSASNGNASSLTQ 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02762 201 MobiDBLite consensus disorder prediction 182 201 - -
Aip05g02762 201 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 10 190 - -
Aip05g02762 201 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 11 10 190 - -
Aip05g02762 201 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 15 63 IPR006456 -
Aip05g02762 201 Pfam ZF-HD protein dimerisation region 14 65 IPR006456 -
Aip05g02762 201 SUPERFAMILY Homeodomain-like 109 181 IPR009057 -
Aip05g02762 201 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 121 181 IPR006455 -
Aip05g02762 201 Gene3D - 106 186 - -
Aip05g02762 201 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 15 64 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02762 Aip-Chr5 127472578 127473414 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02762 15 181 ZF-HD Transcription Factor Family AT4G24660 42.541 5.99e-43 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Aip05g02762 ZF-HD_dimer 3.1e-25 No_clan