Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02761 ATGGATGGGGATAATGGTCTTAACATACGTAATTGGGGTTACTATGAACCTGCTACCTCTTTCAAGAGCCATCTGGGGCTCCAGCTAATGTCATCAATGCCGGAAAAGCCTCTTCTCGGAGGACGCAATGCTGCAGTTTTGTCCGGCACTAATGGTGCCTATCACCATAGGGACATTGGGATGCCCCCGGCTACTTACCCTATGGATTACATGAGGGATGCTTGGATTAGTAGTCAGAGAGAGAAGTATATGAATATGATACCTACAAACCCAAGTTATGGTAGTATTCCGGAGACGTCTTCCACGCATCACATGCAAATGATTCCACCGCCTGAGTTGTCTGCAAAGGAAGAAAGGCCCGTGGAAGAAGCGCCTGTTGTTGAGAAAGCGAACACCACTGGAAAGAAGAGACAGGGTCCCAAGGTTCCGAAATCTCCCAAGGCAAAGAAGCCCAAAAGGGGGCCTCGCGTTCCTAAGGATGAGAATGCTCCTACAGTTCAACGAGCTAGGGCTCCAAAGAAAACTACTGAAATTGTGATAAATGGGATCGACTTGGATATTTCGAGTATTCCAATCCCTGTTTGTTCGTGCACTGGGACACCCCAACAGTGTTACCGATGGGGCTCGGGTGGGTGGCAGTCTGCATGTTGCACAACGGGAATGTCTACATATCCTTTGCCTATGAGTACAAAGCGGCGTGGTGCTAGGATAGCTGGAAGGAAAATGAGTATAGGAGCATTTAAGAAAGTTTTAGAGAAACTTGCAGCTGAGGGTTATAACTTTTCTAATCCAATTGATTTGAGGACTTACTGGGCAAAACATGGTACCAATAAGTTTGTCACTATCAGGTAG 852 0.4683 MDGDNGLNIRNWGYYEPATSFKSHLGLQLMSSMPEKPLLGGRNAAVLSGTNGAYHHRDIGMPPATYPMDYMRDAWISSQREKYMNMIPTNPSYGSIPETSSTHHMQMIPPPELSAKEERPVEEAPVVEKANTTGKKRQGPKVPKSPKAKKPKRGPRVPKDENAPTVQRARAPKKTTEIVINGIDLDISSIPIPVCSCTGTPQQCYRWGSGGWQSACCTTGMSTYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLRTYWAKHGTNKFVTIR 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02761 283 Pfam GAGA binding protein-like family 1 283 IPR010409 -
Aip05g02761 283 PANTHER - 1 283 IPR010409 -
Aip05g02761 283 MobiDBLite consensus disorder prediction 113 173 - -
Aip05g02761 283 PANTHER PROTEIN BASIC PENTACYSTEINE2-LIKE 1 283 - -
Aip05g02761 283 SMART GAGA_bind_2 1 283 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02761 Aip-Chr5 127394483 127396287 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02761 1 283 BBR or BPC Transcription factor family AT2G01930 53.177 2.66e-98 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Aip05g02761 GAGA_bind 6.3e-111 No_clan