LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip05g02731	ATGAGTGCTTCGACGAGGAAGAAGGTGCAGAGGAAGTGCAAGATCAGAGGGCGCGTCCTCAAAGTCGAAGCTCTTGACGAGATCCTCTCCTTCGTCTCTCGATTCGAAGGCCCCGATGAGGACGAAGCCATCGATCTCCTCCTCGACGAACTCGAACTCGAACTCGAATCTCAGAAATCCACTATAATCGAGAAAGAGCCGGTGCACCGTGTGGTGAGCCGGCTGTTGCAAGCTGATGCGGCTGTCGAGGAGAGCTCCGATCCATGCTCTGCCGGCGGTTCTGCCATTCGCGTCGTCGATGCGTTCCTGGTCCCCAAGTTCAGATACGACCCTATTAGAAAGCAGTTCTACGAGCACACAGGCAGCTTGCCTATTCATGGTGACGCATCAGCAAAAGCGGCCTTGTATAGGGATAGGTTTTTGTTGTTGTTCCAGAGGCTCTCTCGAGATCAGAATTTTTCGAAACCTGCTTTTGAATCAGAATTTTCACATTTTGGGAGCTGTGAGATATCTCCTATCCAATCTCTGGTTGGACAAACGGGTAGAAAATGGGTAATGGGAGTAATATCTCAGCTGGAGGATGGACATTTTTATTTAGAAGATCTTACCGCTTCAGTTGAAATTAATTTTTTCTTTGACTATCAATACAAGATAACTACAGGATTCTTTTCTGAGAACACCATAGTTGTTGCTGAAGGCGAGATGCTGGCATCGGGAATATTTCAGGTTTTAACGTGTGGATTTCCCCCACTGGAGGATAGGGATAAGTCACTTAGACAAATTGCAGGGCATGATTTTTTCGGTAGTGGTACTTTAACGAAAGAGGAAACTATCAGACTGGCAGACATGGAGAAAAAAGCAGTCAATGATATGTTTGTTATTCTGTCTGATATTTGGCTAGACAATGAAGAGGCTATGGGAAAGCTGGAGACTGTGCTTGATGGTTTTGAGAGTGTGGAAGTTGTTCCTTCCTTATTTGTCTTCATGGGGAACTTCTCTTCTCATCCATGTAACCTTGCGTTTCATGCTTATTCAACCCTCAGGTCACAGTTTGGAAAGCTAGGGCAACTAATTGCTGCCCATCCACGGCTAACAGAGCACAGTAAATTCCTGTTTATTCCAGGTCCTGATGATGCAGGTAGCCCTTCAACAGTTCTGCCTAGGCGTGCTCTACCGAAATATTTGACAGAGGAGCTCCAAAATCACATACCAAATGCCATATTCTCAAGCAACCCCTGCAGGGTCAAGTTCTATACTCAAGAAATTGTATTTTTCCGCCAGGATATGCTGTATAGAATGCGTCGATCATGTTTAATGCCACCTTCTATGGAAGAAACTGATGATCCTTTTCAGCATCTTGTGGCTACCATGACCCATCAGTCTCATCTCTGTCCACTCCCTCTAACTGTACAACCGATCATCTGGAACTATGACCACTGCCTTTATCTTTATCCAACTCCGCACACGATTGTCTTGGGAGACAGAAGTCAGCAGAAGGCATTCAAGTACACAGGAATCACTTGTTTCAACACTGGTTCCTTCTCAATTGACAGCACTTTCGTGGCATACCGGCCTTGCTCTCAGGAAGTTGAATTGTCAGCCTTGTAA	1608	0.4571	MSASTRKKVQRKCKIRGRVLKVEALDEILSFVSRFEGPDEDEAIDLLLDELELELESQKSTIIEKEPVHRVVSRLLQADAAVEESSDPCSAGGSAIRVVDAFLVPKFRYDPIRKQFYEHTGSLPIHGDASAKAALYRDRFLLLFQRLSRDQNFSKPAFESEFSHFGSCEISPIQSLVGQTGRKWVMGVISQLEDGHFYLEDLTASVEINFFFDYQYKITTGFFSENTIVVAEGEMLASGIFQVLTCGFPPLEDRDKSLRQIAGHDFFGSGTLTKEETIRLADMEKKAVNDMFVILSDIWLDNEEAMGKLETVLDGFESVEVVPSLFVFMGNFSSHPCNLAFHAYSTLRSQFGKLGQLIAAHPRLTEHSKFLFIPGPDDAGSPSTVLPRRALPKYLTEELQNHIPNAIFSSNPCRVKFYTQEIVFFRQDMLYRMRRSCLMPPSMEETDDPFQHLVATMTHQSHLCPLPLTVQPIIWNYDHCLYLYPTPHTIVLGDRSQQKAFKYTGITCFNTGSFSIDSTFVAYRPCSQEVELSAL	535

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip05g02731	535	Coils	Coil	532	535	-	-
	Aip05g02731	535	Gene3D	-	2	74	-	-
	Aip05g02731	535	Pfam	DNA polymerase alpha/epsilon subunit B	292	498	IPR007185	GO:0003677\|GO:0006260
	Aip05g02731	535	PIRSF	DNA_pol_epsilon_2	1	535	IPR016266	GO:0003677\|GO:0006261\|GO:0008622
	Aip05g02731	535	PANTHER	DNA POLYMERASE EPSILON SUBUNIT B	6	534	IPR016266	GO:0003677\|GO:0006261\|GO:0008622

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip05g02731	16	492	Core DNA Replication Machinery Family	AT5G22110	69.602	0.0	684

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip05g02731	K02325		-	qsu:112038614	867.07