Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02725 ATGGTGATCACCTCCGCTGTCACAGATCCTGAAGAACAAACACAAAGCTTGCACTCTACTTTTGCTTCCAGATATGTTCGTGACCCTATTCCCAGGTTCAAGATGCCAGAGAAGTGTATACCAAAGGATGCAGCATATCAGATCATAAACGATGAGTTGATGTTGGATGGAACACCAAGGCTTAACTTGGCATCTTTTGTGACCACTTGGATGGAGCCTGAGTGTGATAAGCTCATCATGGCTTCGCTTAACAAGAACTATGTTGACATGGATGAGTATCCTGTCACCACTGAGCTCCAGAATAGGTGCGTTAATATGATAGCGCACCTATACCATGCTCCTATTGGTGAGGATGAGGCTGCAGTCGGTGTGGGAACCGTCGGATCATCAGAGGCAATAATGTTGGCAGGTCTAGCTTTTAAAAGGAAATGGCAGGCAAAGAGAAAAGCAGAAGGCAAACCTTATGATAAGCCTAACATAGTTACCGGCGCTAATGTGCAGGTTTGTTGGGAGAAGTTTGCACGGTATTTTGAGGTTGAGCTTAAGGAAGTGAAACTCACAGAAGGATGCTATGTGATGGACCCTGTGAAAGCAGTTGAAATGGTTGATGAGAACACCATCTGTGTGGCGGCGATTTTGGGGTCGACACTCACCGGAGAGTTTGAAGATGTGAAGCTTCTTAATGAGCTTCTTACTAAGAAGAATAAGGAGACAGGATGGAATACCTCGATTCATGTTGATGCTGCCAGCGGAGGGTTCATTGCCCCATTTCTCTACCCTGATCTTGAGTGGGATTTTCGCTTACCATTAGTGAAGAGCATCAATGTTAGTGGTCATAAGTATGGTCTTGTCTACCCCGGTGTCGGTTGGGTTGTTTGGAGGAGTAAAGATGACTTGCCAGAGGAACTTGTTTTTCACATAAACTATCTCGGATCGGATCAGCCAACATTTACCCTCAATTTCTCCAAAGCAGGCTCTAGTCAAATTATTGCTCAATATTACCAATTTATACGGCTTGGCACTGAGGGCTACAAAAATATCATGGAGAACTGCAGGGAGAATGCAAGAATTCTGAGGGAGGGAATTGAGAAAATGGGCCGGTTCAATATCGTCTCTAAGGACGTTGGCGTGCCGCTTGTCGCCTTCTCTTTGAAAGACAGCAGCCAACACACAGTGTTTGAGGTGTCAGACCATCTGAGAAAATTTGGCTGGATAGTTCCGGCCTACACAATGCCGCCAGACGCGCAGCACATTGCGGTCCTCCGGGTGGTGATCAGGGAGGATTTCAGCCGCGGATTGGCGGAGAGACTCGTGTCCGACATAGTGAAAGTTGTGGATCTCTTGGACACACTTCCAAGCCCTCTATCAACAAAAAAGGCACATGTGGTAGCTGTTGCTAATAATGAGACAAGTGAGAAGGCTAAGAAGAGTGCATTAGAGACTCAGAAAGAGATTGCCTTGTATTGGAAGAGGCTTGTGGATGGCAAAAGAGTTGGAGCATGTTAG 1506 0.4615 MVITSAVTDPEEQTQSLHSTFASRYVRDPIPRFKMPEKCIPKDAAYQIINDELMLDGTPRLNLASFVTTWMEPECDKLIMASLNKNYVDMDEYPVTTELQNRCVNMIAHLYHAPIGEDEAAVGVGTVGSSEAIMLAGLAFKRKWQAKRKAEGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLTEGCYVMDPVKAVEMVDENTICVAAILGSTLTGEFEDVKLLNELLTKKNKETGWNTSIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYPGVGWVVWRSKDDLPEELVFHINYLGSDQPTFTLNFSKAGSSQIIAQYYQFIRLGTEGYKNIMENCRENARILREGIEKMGRFNIVSKDVGVPLVAFSLKDSSQHTVFEVSDHLRKFGWIVPAYTMPPDAQHIAVLRVVIREDFSRGLAERLVSDIVKVVDLLDTLPSPLSTKKAHVVAVANNETSEKAKKSALETQKEIALYWKRLVDGKRVGAC 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02725 501 Gene3D - 1 68 - -
Aip05g02725 501 PANTHER GLUTAMATE DECARBOXYLASE 3 501 - -
Aip05g02725 501 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 19 448 IPR010107 GO:0004351|GO:0006536|GO:0030170
Aip05g02725 501 SUPERFAMILY PLP-dependent transferases 14 447 IPR015424 -
Aip05g02725 501 Gene3D - 365 452 - -
Aip05g02725 501 Pfam Pyridoxal-dependent decarboxylase conserved domain 36 385 IPR002129 GO:0016830|GO:0019752|GO:0030170
Aip05g02725 501 Gene3D - 69 364 IPR015421 GO:0003824
Aip05g02725 501 PANTHER GLUTAMATE DECARBOXYLASE 3 501 IPR010107 GO:0004351|GO:0006536|GO:0030170
Aip05g02725 501 CDD DOPA_deC_like 62 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02725 Aip-Chr5 126762115 126766263 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02725 12 501 Calmodulin-binding Proteins AT3G17760 79.388 0.0 812
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02725 K01580 - gmx:100796475 901.353