Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02721 ATGGTATACGGTGTCCCGGAAAATGAGGTAGTGTCTACCATTCTTGGACGTGTTAATCCCTTGCTGTTTACAATGCTGATGGTGCAGCATGCAATTCAAATAGTGAGGTATTTTCCCAACCAATTGTTTGGCACGCATGAGACCATTCGGAGTGTTTTTGCGACGAATGTTGTTGTCCTTGTACTAATTGGACATCTTGTTGGTTGTTTCGGATATCTTGCTGCTGTAGAGAAAGTTGAGAAATGTTTGCGAACTACCTGCAGCGCTTCTGGCTTAACTGGATGTAAGAGTCTCATTGTTTGTGAAGCTAAGAAAAACAATGATGAAGATCAGTGGTTGATAAATACAGCTGCCAGCAACTGTTTCAATTCTTCCTCTAATACTTCTGGCAATGGGATCTTTGCTGATCTAATGCCACTTGTGGAATATGATCCGGTCCAAAAATATGCATTTGCTCTGTTCTGGGGTATCACGCAAATTAGTTTCATTTCTGTTAAAACTCCAAGCTTCTCTAGCGTGAAAGAAGTCATTTTCCTATGGATTATCAGAGCATTGGGGCTCTCAATTTTTGCAATCATATTTGGAAACATAACAAGTATTATTCAAGGTTTCAGTCGGAGGAAGATAGATAACATACTTAGACGCAATGAAATTGAACGATGGTCAAGGCATCGTCACCTACCAGAAGATTTAAGCAGGAGAATACTAGATGCTGAAATTCAGAATTGGACTGCAACAAAAGGGATGAAGGAAGAAGAACTTTTGAAGAGTATGCCAAAGGATATCCAGAGAGACCTAACAAGGCATCAGTTTCTCCCCATTATTAAAAAGGTTCAACTCTTTGAAATCATGCACCAGTCAATTCTTGATGCTATCTGTATGCAATCAAAGTGGAAGCTGTACTTGGCAGACAGTACAATCATGTATCCAGGTGACTTAATAGAGATGATAGTCTTTGTTGTGCATGGAACACTGGAGATCAAGGACACCAGTGGAACAAGCGTCCACATATCTGACGGGGATGCATGTTGCCAAGAACTCCTTTTCTGGTGTCTTCAGAGAGCTTCATCCAATAGTAGCACAGATGGTGACAAATTATTTTTTCCTGAAGAAAGATTTCTGAGCACCAAGAGTATAACTTGTTTAACAGATGTGGAGGCATTTGTGGTTGAAGTTACTGACCTTGAAAAGATCCTAACTCGGTTTGCAAAATTCTTGCACACTCCACTTATTGAAGAGGCCATAAAAAGGCACGAAATGCTTGAAAGGCTGCATGAAGAATCAGGAAGCAACCAAGAAGAACCACAGAGTACTACTGTCCCAGAGGAAAATTAG 1335 0.4052 MVYGVPENEVVSTILGRVNPLLFTMLMVQHAIQIVRYFPNQLFGTHETIRSVFATNVVVLVLIGHLVGCFGYLAAVEKVEKCLRTTCSASGLTGCKSLIVCEAKKNNDEDQWLINTAASNCFNSSSNTSGNGIFADLMPLVEYDPVQKYAFALFWGITQISFISVKTPSFSSVKEVIFLWIIRALGLSIFAIIFGNITSIIQGFSRRKIDNILRRNEIERWSRHRHLPEDLSRRILDAEIQNWTATKGMKEEELLKSMPKDIQRDLTRHQFLPIIKKVQLFEIMHQSILDAICMQSKWKLYLADSTIMYPGDLIEMIVFVVHGTLEIKDTSGTSVHISDGDACCQELLFWCLQRASSNSSTDGDKLFFPEERFLSTKSITCLTDVEAFVVEVTDLEKILTRFAKFLHTPLIEEAIKRHEMLERLHEESGSNQEEPQSTTVPEEN 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02721 444 CDD CAP_ED 280 407 IPR000595 -
Aip05g02721 444 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 18 418 - -
Aip05g02721 444 Gene3D Jelly Rolls 278 404 IPR014710 -
Aip05g02721 444 SUPERFAMILY Voltage-gated potassium channels 23 208 - -
Aip05g02721 444 Gene3D Helix hairpin bin 213 269 - -
Aip05g02721 444 SUPERFAMILY cAMP-binding domain-like 214 406 IPR018490 -
Aip05g02721 444 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 20, CHLOROPLASTIC-RELATED 18 418 - -
Aip05g02721 444 MobiDBLite consensus disorder prediction 424 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02721 Aip-Chr5 126427123 126439072 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02721 21 361 Ion Channels AT3G17700 35.143 1.42e-59 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02721 K05391 - gmx:100781973 295.049