Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02709 ATGACGACGACGCCTCTCCAATTCTCCACCAGTTCATCTTCGTGGCGCCAGTTGCTCTCCATGGTTTGTAAAGTTGCTGCCGTCTGCGGGCCCCTCGATTTGCATCGCCACGGTCTCGGAGTTGTGCCTCTGGTCTCTGCGGTTTCTTTGTCAATGGACTTGTTTGCTTGGTTGTTTGGTTTTTTTGTTATTGGTGCCATTGTATTTGGTATTGCTCGTTGTACAAATATGAAGACAAGAGTGGATAAAAAAATCTGCCCATGGTGGAATGACCCATGCTTATTTAAAGCACTTGACGCTATTGAAGTTCCTGAGCGAGACCCCAAAGGCCCCTTTAGGATGCCTATAATTGACAAATTCAAAGACATGGGAACTGTTGTTATGGGAAAAGTGAAATCTGGTACTGTTCGTGAGGGAGACTCCTTGTTGGTTATGCCAAATAAGGTTCTCCCTTTATTCTTTGCCATGCTTTGCTTAAAATTGGTGATTTGTGCTTCATCAATTGCGTAG 510 0.4471 MTTTPLQFSTSSSSWRQLLSMVCKVAAVCGPLDLHRHGLGVVPLVSAVSLSMDLFAWLFGFFVIGAIVFGIARCTNMKTRVDKKICPWWNDPCLFKALDAIEVPERDPKGPFRMPIIDKFKDMGTVVMGKVKSGTVREGDSLLVMPNKVLPLFFAMLCLKLVICASSIA 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02709 169 SUPERFAMILY Translation proteins 103 149 IPR009000 -
Aip05g02709 169 PANTHER TRANSLATION FACTOR 74 154 - -
Aip05g02709 169 PANTHER - 74 154 - -
Aip05g02709 169 Gene3D Translation factors 82 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02709 Aip-Chr5 126005444 126006684 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02709 82 147 Eukaryotic Initiation Factors Gene Family AT5G10630 37.681 3.85e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02709 K03267 - aip:110263001 157.532