Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02704 ATGTCACCAGTTGGATTACCACCTGGGTTTAGGTTTCATCCAACAGATGAAGAGCTTGTTAACTATTATCTAAAGAGGAAGATCAATGGCCAAGAAATTGAACTTGATATCATTCCTGAGGTTGATCTCTACAAATGTGAACCATGGGAATTAGCAGAAAAATCATTTTTGCCGAGTAGAGATCCAGAGTGGTATTTCTTTGGACCAAGGGACAGAAAATACCCTAACGGATTTAGAACAAATAGAGCAACACGAGCAGGGTACTGGAAATCAACAGGTAAAGACAGGAGAGTTTCAAGCCAAAGCAGACCAATTGGTATGAAGAAGACTTTGGTTTATTATAGAGGAAGGGCTCCTCAAGGAATCAGAACTGATTGGGTTATGCACGAATATCGTCTCGATGACAAGGACTCTGAAGACACCACCGGTTTACAGGATACTTATGCTTTGTGCCGTGTGTTCAAGAAAAATGGAATATGTACGGATGTTGAAGAGCAAGTAGGGCATTGTAGTAACATGTCTTCACTAATTGAGAGCTCACAAACCATAATCAATAATAATAACAATAATAGTAATAATAATAATGAGTATTGTGAAACCATGTCACCAGACATAGCAGGGGTTTCATCTTCATGTTTGGAAGAGGAAGACAAAGATGATTCATGGATGCAGTTCATCACGGAAGATGCATGGTACTCTTCTAATGCACCAAATATGGTTGGTGGTGAAGAAGTTTCACATGTTACATTTACAAGCTAA 759 0.39 MSPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVSSQSRPIGMKKTLVYYRGRAPQGIRTDWVMHEYRLDDKDSEDTTGLQDTYALCRVFKKNGICTDVEEQVGHCSNMSSLIESSQTIINNNNNNSNNNNEYCETMSPDIAGVSSSCLEEEDKDDSWMQFITEDAWYSSNAPNMVGGEEVSHVTFTS 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02704 252 Gene3D NAC domain 15 159 IPR036093 GO:0003677|GO:0006355
Aip05g02704 252 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Aip05g02704 252 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 1 251 - -
Aip05g02704 252 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 251 - -
Aip05g02704 252 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Aip05g02704 252 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02704 Aip-Chr5 125917990 125923312 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02704 1 245 NAC Transcription Factor Family AT3G17730 76.984 1.79e-133 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aip05g02704 NAM 6.5e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02704 - - adu:107490712 518.464