Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02677 ATGAATGGAAAAGCCTCCGTCTCTAAGGAACTTAATGCCAAACACATCAAGGTTCCATTTTCCCTTTACTCTTTATTTTATTTTAATTTATTTATTGATGCTTTCGAGTTGATACAGGTTTTAGAGGGACTTGTTAGGCTACCTGACAATAGGGAATGTGCAGATTGCCGGAATAAGGCACCACGATGGGCAAGTGTGAACCTAGGAATTTTCATTTGCATGCAGTGTTCAGGAATTCACCGAAGTCTTGGAGTACACATATCACAGGTGCGGTCTACAACTTTGGATACATGGTTGCCAGAACAAGTGTCTTTCATGCAACTTATGGGTAATGTGAATGCCAATAAGCACTGGGAGGCTGAGCTGCCGACGAATTTTGACAGAAATCGATATGGAATCGACAAATTTATTCGCGCCAAGTATGTGGATAAAAAATGGGCTTCAAAACATGGTCTACAAGCAGCATCTGCAAAGTCATCTGAAACATTGAGGAATCATCAAAGGAATAGAAGATTGTCTCTTGAGGAAAGCATTCTTGTGGGCCACATGGCGCAAATTCAGCCGCCACAGCCGCAAGTAGCAAAATCTCATGAGATCCCCTCAGGTTTGGAAAGAAAGAAAAGTGCACCACAACAACTTCAACTCCTACAAGCTGGACAACATTTGATTGAGATTACATTATTTTGTGGCAAAACCTTTGTGGAGAGCAATATTGGTTTTGAATTGAGGAGCATGCTAAGTTTAGCATCAACATATACTTTTGGCAGAATTGAGGAGCATGCTAAGCTTACCATTAGGATTTAA 804 0.408 MNGKASVSKELNAKHIKVPFSLYSLFYFNLFIDAFELIQVLEGLVRLPDNRECADCRNKAPRWASVNLGIFICMQCSGIHRSLGVHISQVRSTTLDTWLPEQVSFMQLMGNVNANKHWEAELPTNFDRNRYGIDKFIRAKYVDKKWASKHGLQAASAKSSETLRNHQRNRRLSLEESILVGHMAQIQPPQPQVAKSHEIPSGLERKKSAPQQLQLLQAGQHLIEITLFCGKTFVESNIGFELRSMLSLASTYTFGRIEEHAKLTIRI 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02677 267 ProSiteProfiles ARF GTPase-activating proteins domain profile. 38 154 IPR001164 GO:0005096
Aip05g02677 267 SUPERFAMILY ArfGap/RecO-like zinc finger 39 148 IPR037278 -
Aip05g02677 267 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD15-RELATED 1 211 - -
Aip05g02677 267 Pfam Putative GTPase activating protein for Arf 40 149 IPR001164 GO:0005096
Aip05g02677 267 PRINTS HIV Rev interacting protein signature 50 69 IPR001164 GO:0005096
Aip05g02677 267 PRINTS HIV Rev interacting protein signature 69 86 IPR001164 GO:0005096
Aip05g02677 267 PRINTS HIV Rev interacting protein signature 90 111 IPR001164 GO:0005096
Aip05g02677 267 CDD ArfGap 41 141 - -
Aip05g02677 267 Gene3D Arf GTPase activating protein 33 154 IPR038508 -
Aip05g02677 267 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 211 IPR044520 GO:0005096
Aip05g02677 267 SMART arf_gap_3 38 154 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02677 Aip-Chr5 125127970 125132792 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02677 41 160 C2H2 Transcription Factor Family AT4G05330 44.444 1.62e-28 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02677 K12486 - gmx:100802691 269.626