Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02668 ATGCCATTTTCTCATCTTCTTCCTCTGCTGTATCTCTGGTTCGCCTATTCTCGCCGCCACAACACGCATCAGACGCCGCCGCTCCCTGTGTCCGCCGCCGCTCCTCACAGACTCCGAGGAACGAACTATCAGTATCACCACCCTGTTAAATTTCGCAGAGAAAGAACGAGAACCAGAGCGACCCTTGATGACACTGAAATAGGACAACTTTCCTCAACCCCACTTCTTGTTGAGGACGACAAACCCAGCAAGGAAGTAGAGGAAAGTGTAAAAGTGCTAAAAGATACAGCTAAGACAAGAAAGGTAGCAGCGGAGAAGGTTCTAAACAATTCTGGTGATGATGAAAGTGTAGGTACGAATAGAAGAAAGAAAGACTCAGCAAAGAAAAGAAAGTTTGCTGATTTCCAAAAGGAAGAACATGAAGCAAGAAATAAGGTTCCAAATTCTGATAAACTAAGTTTGAAGCGAATAGATAGCATGACACTTGAAGAAGTTATGGGTCAGGAATTTTCTCATGAAGGGGTTAATAGCGAGCATACATCATATGATCAGTATGAGCAGGAGGAAGAAAAACATGAGGAAGTTGATGTGGATTATATGGATGAGGATGACACAAATGTGGAACCAATGTTCGATTTTCACGGCTTCGATGAAGGGTATAACATTGACTCACTCGAAGACATTAGGATGATTGAATTTTGGAACATCGGGGATGAAGATGTATGTCATTTTCACTTTTCTGATGTCGACATTGCATTTGAGTTCTACAATAGATATGCAAGGACAAGAGGCTTTAGTGCTCGGAAGAACGGGACTAGGAAGAGTCGTGCGAGCGCACTTAAGTTGAAGAATTTTGTATGTCATCGTGAAGGATTTAGACCGCCAAATAATTACGGCATCGAAAACCTTAAGAGAAAACCTACACCCGAGACAAGGTGTGGCTGCAGTGCAATGATGGAGATTCGTGTAGATGCACCTAGTGGTCGTTGGTTTATTTCTTATTTTTCTGATGAACACAATCATCCGCTTCTGGATCCTCGGTTGACTGGATTGCTCCCTGGGCATAGATTCATGTCCGAGGCTGATATTGGCCACATGGTTAACATGAAAAAGGGTGGGATTAGTGTTGGACAGATATATCGGGCATTAGAAAATCAGGCAGGTGGCTACGAGTATCTCTCTTTCACGCAAAGGGACATGTACAATAAAATAGCAAAGCAGAGGCGCCAATTACCCAATGATGCATATGCAGTTTTGAAGTATCTAGAAGATCAAGCAACAAATGACCCTTCTCTCTATTATAATCATCACATGGATGCTGATAGTACTTTGCGCAATTTATTCTGGTGTGATGGTCTCAGTAGGGCAGACTACTCATTATTTGGCGACGTACTGGCTTTTGATGCTACCTATAAGAGAAATAAATATATGTGTCCACTGGTGGTATTTTCTGGTATCAATCATCATAATCAAACAATTATCTTTGCTGCTGCTTTAATTTGCGATGAGGAAAAAGACACATATAGGTGGTTGCTACAACAACTGAAGGCGGCAATGAATGGGAAAGAACATGTTTCGGTGATCACGGATGGTGATCTATCAATGAAGTTCGCCATTGAGAAAGAGTTTCCTAATGCACATCATAGATTATGTGCATAG 1659 0.4201 MPFSHLLPLLYLWFAYSRRHNTHQTPPLPVSAAAPHRLRGTNYQYHHPVKFRRERTRTRATLDDTEIGQLSSTPLLVEDDKPSKEVEESVKVLKDTAKTRKVAAEKVLNNSGDDESVGTNRRKKDSAKKRKFADFQKEEHEARNKVPNSDKLSLKRIDSMTLEEVMGQEFSHEGVNSEHTSYDQYEQEEEKHEEVDVDYMDEDDTNVEPMFDFHGFDEGYNIDSLEDIRMIEFWNIGDEDVCHFHFSDVDIAFEFYNRYARTRGFSARKNGTRKSRASALKLKNFVCHREGFRPPNNYGIENLKRKPTPETRCGCSAMMEIRVDAPSGRWFISYFSDEHNHPLLDPRLTGLLPGHRFMSEADIGHMVNMKKGGISVGQIYRALENQAGGYEYLSFTQRDMYNKIAKQRRQLPNDAYAVLKYLEDQATNDPSLYYNHHMDADSTLRNLFWCDGLSRADYSLFGDVLAFDATYKRNKYMCPLVVFSGINHHNQTIIFAAALICDEEKDTYRWLLQQLKAAMNGKEHVSVITDGDLSMKFAIEKEFPNAHHRLCA 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02668 552 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 242 551 IPR031052 GO:0006355
Aip05g02668 552 MobiDBLite consensus disorder prediction 106 150 - -
Aip05g02668 552 Pfam FAR1 DNA-binding domain 254 344 IPR004330 -
Aip05g02668 552 PANTHER OS02G0262500 PROTEIN 242 551 - -
Aip05g02668 552 MobiDBLite consensus disorder prediction 129 150 - -
Aip05g02668 552 Pfam MULE transposase domain 464 551 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02668 Aip-Chr5 124908182 124913651 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip05g02668 FAR1 1.7e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02668 - - aip:107641043 792.341