Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02645 ATGGTGTCGTCATCTCCATCAATGGAAAGAAGGGTGGCCGGGGATGAAGATATCCCTGGGGGCGTGCGTGCCTCCGACGAAGCAGAAATGTACGACGGAGCAGACCATGGAGTTAGATCGGTTGAGGGCGAAGGCTTTATAGGGATGGAGTCGGATGAGTACGATTTACACGAAGATGAAACAGAACACGACCATCATACAGAGGCCGATGTCGACAATGAGGATGGGGTTGAATTGGAAGACAATTTGGACCACGTCGGAGGAATGTATGACAATTTTCTGGATGATGACTTATATGCTGTTGATTCTGATAAATTGATAGGTTCGATTGATTTTGTGAACTTGAGCGAGGAGGAAGTTTGTCGCTTCAATTTTGCAGATGTTGACATTGTGTTTGAGTTCTACCAGCAATATGCAAAGCACCATGGCTTCGGCGCGAGACATTATAGGAGCAAAAAATGTGGCAAAGTAAGGATACGGCAGGAATTTGTGTGCCACATACAAAGGTACCGATCGCTGAAGTTCTACTCAATTCCTAACCGGCAAAAGAGGCCGAGGGCCAAGACACAGTGCGGATGCCCTGCAAGGATGCATGTTCACATGGACGATAAATCCGAACGTTGGTACGTTGCATACTTTTCAGACGCGCATAACCACCCTGTTCTTGAATTGTGA 675 0.4696 MVSSSPSMERRVAGDEDIPGGVRASDEAEMYDGADHGVRSVEGEGFIGMESDEYDLHEDETEHDHHTEADVDNEDGVELEDNLDHVGGMYDNFLDDDLYAVDSDKLIGSIDFVNLSEEEVCRFNFADVDIVFEFYQQYAKHHGFGARHYRSKKCGKVRIRQEFVCHIQRYRSLKFYSIPNRQKRPRAKTQCGCPARMHVHMDDKSERWYVAYFSDAHNHPVLEL 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02645 224 MobiDBLite consensus disorder prediction 10 32 - -
Aip05g02645 224 MobiDBLite consensus disorder prediction 57 76 - -
Aip05g02645 224 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 94 221 - -
Aip05g02645 224 MobiDBLite consensus disorder prediction 1 32 - -
Aip05g02645 224 ProSiteProfiles WRKY domain profile. 168 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip05g02645 224 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 94 221 - -
Aip05g02645 224 Pfam FAR1 DNA-binding domain 133 222 IPR004330 -
Aip05g02645 224 MobiDBLite consensus disorder prediction 58 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02645 Aip-Chr5 124380622 124381433 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip05g02645 FAR1 9.9e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02645 - - aip:110265290 290.041