Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02644 ATGAACATCGATGACAATAAGAACTTAGAGGAGTCTATCGAATATGATGAGCTGTGTTTTCGGTATAATAGTAGTTCTGATAAGGAGGAGGAAGATATTATCAACAATGAGGGTAAATTTAGTGAATCCAGGGAGGTGTCGAATTGTAGCTATAAAATTCAAGAAGTTGAGAAAAAGTTAAACGAATTAAGCTATGATGACATGTGGGGTATTGAGTTTGACACCGTTGATCAATGTTGTGATTTTTATAGAAATTATGCTAGAGTGCACGGTTTTGTTGCGAGGCTTGACGAAAAAGGACAAGATTTCAATGGAAACCTTAATATGCGACAGATGCTTTGTAACAGAGAGGGTACACATAGAAAAAAGTACTTGGAGATGGAGAACAGAAAAAAGGATCACAAGCCAATCACACGTGTAATATGTCAAGCAAAGATTAGATTTCACTATGACTTGATTTTACAAAAGTGGCGAGTCACCAAATTTGAAGAGACTCACAACCATGACATCATCCCACCTAAGTATATCCAGTTTGTTCCAGCATATCGAACAATGATTGCCGCTGATAAAGCACAGGCTGATAGTTTGCACTTTTATGGTGTTAGAACCTGTCATATAATGGGGTTCATGGTGGCACAAAAAGAAGATGAGGATCCACTATTGCAAGGGAAGTTTACTTTGAAGGATGGAACAAATGATCATGGACAAACATGCATTTTTGGTTGTGGTTTATTATCCGATGAGAAGCGGGAAACCTATATTTTAGTGTTGAATATGTTCATGGAGATAATAGGTAATAAACAACCTATAGCCGTGGTGACAGATGGAGATCTTGCAATGAGGGAGGCAATAAAAGAAGTTCTTCCAAACGTTGCACACCGTCTTTGTGCATGGCATCTATACCGTAATGCTTGTGAAGCTATAAAGAATTCAAAATTCTTAGATGGGTTAAAGCACCTAATACATGACCACATCGATATCATTCCTGATACTCTTGTCTGCACGAGGTGGACTAAAAATGCTAAGAAAGATTATGTATGTTCAGTTACATCCGCAGAAACTGACTCTGAAAATATTGATGGTATTAGATATGGTGCTCTAGCAACACTGTGTTTCACATTATGTGAGTCAGCATTAAAGAACCGAGATGACTTCATGGAGATTAGAGATGACATTTTTGGACTAATTCAAAAGCTTAAAAAGAGACGCGATCCTGACTCCAATGTTCTTTCTAATGCGTGTATGGTCGATGACCCAACTGTTGTGAAGACAAAGGGAGCCTCTCGTCAAAATAGATGGGCGGTAAAATCTCGTAAGTGTTCTCATTATACACGTTGTGGTCATACGATTCGAAGGTGGCCAGAATTATATAGTAGAGACATCCTACATACTGGTCATCACCAATCGAGTGATGAACTCAATGATGCGAAGAGTGAGCAACCAAATAACCATGATACTGGAAAAACATGTCAACCTAATCCAATAGATCTTGTGAAGTTCCAGAACCAGCATTTGAATGGATTACCTGTGTATCCTACTTTTCCAGGATTTTCCGTTCCACCTTATCATCCATACAATGGAACACCTTTGTACCAGTCATATTCTCCATATTATTATAATGTGCCTAATGGAAATCTATTTTGGAATGGAGAGGTTCATGATGTTAATGAAAATAGAAAGCAGTGA 1686 0.3808 MNIDDNKNLEESIEYDELCFRYNSSSDKEEEDIINNEGKFSESREVSNCSYKIQEVEKKLNELSYDDMWGIEFDTVDQCCDFYRNYARVHGFVARLDEKGQDFNGNLNMRQMLCNREGTHRKKYLEMENRKKDHKPITRVICQAKIRFHYDLILQKWRVTKFEETHNHDIIPPKYIQFVPAYRTMIAADKAQADSLHFYGVRTCHIMGFMVAQKEDEDPLLQGKFTLKDGTNDHGQTCIFGCGLLSDEKRETYILVLNMFMEIIGNKQPIAVVTDGDLAMREAIKEVLPNVAHRLCAWHLYRNACEAIKNSKFLDGLKHLIHDHIDIIPDTLVCTRWTKNAKKDYVCSVTSAETDSENIDGIRYGALATLCFTLCESALKNRDDFMEIRDDIFGLIQKLKKRRDPDSNVLSNACMVDDPTVVKTKGASRQNRWAVKSRKCSHYTRCGHTIRRWPELYSRDILHTGHHQSSDELNDAKSEQPNNHDTGKTCQPNPIDLVKFQNQHLNGLPVYPTFPGFSVPPYHPYNGTPLYQSYSPYYYNVPNGNLFWNGEVHDVNENRKQ 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02644 561 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 65 215 IPR031052 GO:0006355
Aip05g02644 561 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 230 327 IPR031052 GO:0006355
Aip05g02644 561 Pfam MULE transposase domain 230 303 IPR018289 -
Aip05g02644 561 Pfam FAR1 DNA-binding domain 81 171 IPR004330 -
Aip05g02644 561 MobiDBLite consensus disorder prediction 467 482 - -
Aip05g02644 561 MobiDBLite consensus disorder prediction 467 493 - -
Aip05g02644 561 PANTHER OS02G0262500 PROTEIN 65 215 - -
Aip05g02644 561 PANTHER OS02G0262500 PROTEIN 230 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02644 Aip-Chr5 124366029 124369102 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip05g02644 FAR1 6.2e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02644 - - adu:107485383 555.829