Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02638 ATGGACGAGCCTATTTTAGATGCCATTTGTGAGAAGTTAAGACACAAGATATACATCAAAGGAAGCAATATCTTGTATAATGGTGGTCTAGTGGAGAAGATGGTCTTTGTTATGCATGGGAAATTGGAGAGCATCGAAGGAGAAGATGGAATTAGAATGAGCTTAACCCAAGGGGATGCTTGTGGTGAAGAACTCTTGCAGTGGTGTTTGGAGAATTCATTACTCTACACAGCAAGCAGAAAAATAAGATTTCCAGAAAAAGTCTTACTTAGTGAAAGGACAGTAAGGGCCTTAACAAATGTGGAGGTGTTTTCACTCCGAGCTGATGACCTTGAAGAAGTAATAATTCGTTTCTCAAGATTCTTTCGAAGTCCACGTGTTCAAGCAGCCCTAAGGTATGAATCACCTTATTGGAGATCCCTTGCTGCAACACGGATTCAGATGGCGTGGCGATACAGGAAGAACCGATTAAATCGTAAGCGTGCTGCCTCACAAACAAATTAG 504 0.4147 MDEPILDAICEKLRHKIYIKGSNILYNGGLVEKMVFVMHGKLESIEGEDGIRMSLTQGDACGEELLQWCLENSLLYTASRKIRFPEKVLLSERTVRALTNVEVFSLRADDLEEVIIRFSRFFRSPRVQAALRYESPYWRSLAATRIQMAWRYRKNRLNRKRAASQTN 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02638 167 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 162 - -
Aip05g02638 167 Gene3D Jelly Rolls 1 120 IPR014710 -
Aip05g02638 167 SUPERFAMILY cAMP-binding domain-like 1 122 IPR018490 -
Aip05g02638 167 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 1 162 - -
Aip05g02638 167 CDD CAP_ED 1 115 IPR000595 -
Aip05g02638 167 ProSiteProfiles cAMP/cGMP binding motif profile. 1 66 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02638 Aip-Chr5 124137148 124138204 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02638 1 151 Ion Channels AT1G19780 40.385 8.21e-28 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02638 K05391 - ahf:112748967 323.553